| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0220 |
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| Symbol | |
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| ID | 4083000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 227943 |
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| End bp | 229475 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638008579 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_615277 |
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| Protein GI | 103485716 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGTC TCGAAATGCT CGACAGCGGC TTTGCCACCC TGCCCGCCCT TGTCCGCGCG
CACGCCGCGG AACGTCCCGA TGCCGTAGCG GCGGCCGACG CAGAACGACG GCTCACCTGG
TCCGACCTCG ATCGATTGAC CGACCGAATC GCCGCGCGCC TGCAACGGGA CGGTTTGGTC
AAGGGCGACC GCACGGCGAT CGCGGGCCTG AACAGCGTCG AGCAGATGGC GGTGATCCTT
GGCACGCTGC GCGCCGGCGG GGTTGCGGGG CTGATCACCA ACAGCGCGAC GGGCGAACAG
ATGGCGGCGA TGATCGCCGA CACCGGGGCG CGCCACCTGT TCCTCGACAC GGCGGCGAAG
GCGAGCCTCG ACGGGCAGGA CATCGCCGCG AGCGACCTGA TCGCGATGGA CGGCGGCGAC
GCGGGCACGC CGCTGACCGA CTGGATTGCG CCCGCAGACG CCGCGCCGCA GCCCGCCGCG
ATCGGCCCCG ACGACGGTTT CAACATCATC TATTCATCGG GCACCACCGG CACGCCGAAA
GGCATCATCC ACAGCCATGC AATGCGCTGG CAGCATATCC AGCGCGGCGC GCCCGCCTAT
GGCCCGAACG CAGTGACGAT CCTGTCGACG CCGCTCTATT CGAACACGAC GATGGCCAGT
TTCATGCCAA CCGTCGGATC GGGCGGACGG GTCGTCCTGA TGAAAAAGTT CGACGCGCGC
GGCTTCCTCG AACTGGCGGA GCGCGAGCGC GCGACCAACT GCATGCTCGT GCCGGTGCAA
TATCGCCGCA TCATGGCGCT CGACGATTTC GACCGCTTCG ACCTTTCGAG CTTCGTGATG
AAATACTGCA CCTCGGCGCC TTTTCCAGCG GCGCTCAAGG CCGATGTGCT GAAACGCTGG
CCGGGTGGGC TGGTCGAGAT TTACGGCATG ACCGAAGGCG GCGCGGCCTT CATCCTCGAA
GCGCATCAGT TCCCTGACAA GCTGCACACC GTCGGCAAAC CCGCGCCGGG CCATGTCGCC
AAGGTGATCG ACGAGGACGG CAACGAACTG CCGCAAGGGT CGGTGGGGGA GATTGTCGGC
CGTTCACCCG CAATGATGAC CGGGTACAAC AACCGCCCCG ACGCGACGAA GGCGATGCAC
TGGTACGACA GCGAGGGACA GCTCTTCTAT CGCCATGGCG ATATCGGGCG GATCGACGAG
GACGGTTTCC TGACGCTGAT GGACCGCGCG AAGGACATGA TCATTTCGGG TGGCTTCAAC
ATCTTTCCGA GCGACCTTGA GGCCATTTTG CTCGCCGACG AGCGCGTCGT CGAGGCGGCC
GTGGTCGGGA TGCCCAGCGA GGAATGGGGC GAAACCCCCG TCGCCTTCGT CGTGCTGAAA
CCCGGCGCCG ATGCCGAAAG CGTGCGCGAG ACGTGCAACG CCAAGGTCGG CAAGACGCAG
CGGCTGAGCG CGATCAGGCA AGTCGACGAA CTGCCGCGCA GTCCCATCGG CAAGGTACTG
AAACGCGAAC TGCGCGACGC GCATGGCGGA TAG
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| Protein sequence | MTSLEMLDSG FATLPALVRA HAAERPDAVA AADAERRLTW SDLDRLTDRI AARLQRDGLV
KGDRTAIAGL NSVEQMAVIL GTLRAGGVAG LITNSATGEQ MAAMIADTGA RHLFLDTAAK
ASLDGQDIAA SDLIAMDGGD AGTPLTDWIA PADAAPQPAA IGPDDGFNII YSSGTTGTPK
GIIHSHAMRW QHIQRGAPAY GPNAVTILST PLYSNTTMAS FMPTVGSGGR VVLMKKFDAR
GFLELAERER ATNCMLVPVQ YRRIMALDDF DRFDLSSFVM KYCTSAPFPA ALKADVLKRW
PGGLVEIYGM TEGGAAFILE AHQFPDKLHT VGKPAPGHVA KVIDEDGNEL PQGSVGEIVG
RSPAMMTGYN NRPDATKAMH WYDSEGQLFY RHGDIGRIDE DGFLTLMDRA KDMIISGGFN
IFPSDLEAIL LADERVVEAA VVGMPSEEWG ETPVAFVVLK PGADAESVRE TCNAKVGKTQ
RLSAIRQVDE LPRSPIGKVL KRELRDAHGG
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