Gene Sala_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0215 
Symbol 
ID4082131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp224369 
End bp224779 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content68% 
IMG OID638008574 
ProductFe-S metabolism associated SufE 
Protein accessionYP_615272 
Protein GI103485711 
COG category[R] General function prediction only 
COG ID[COG2166] SufE protein probably involved in Fe-S center assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGCC TTTCCGACAT TTTCGAAGAA TATGAGTTTC TCGACGGTGA CGACCGCTAT 
CGCCTGCTGA TCGAACTCGG CCGCGAACTG GAGCCGATGC CCGATGCGCT CAAGACCGAC
GCGACGCTGG TGCGCGGCTG TTCGGCGAGC GTGTGGGTCT ATCCGGTACC GCGGGACGAC
GGCCGCCTGC ATTTCCTTGC CGACAGCAAT GCCGCGATCA CCAAGGGCAT CGTCGCGCTC
GTCCTCGCCG CGGTGCAGGA CAAGCCCGCG GCCGAGGTCG CCGACATGGA CGTCGCCGCC
GCGCTCGCGC CCTTCGACCT GACGCGCCAG CTTTCGTCGA ACCGCACGCA GGGCGTGCCC
AACATGATCG CGCTCGTCCG GGACACCGCC CGCCGCCTCG CCGCGGGCTG A
 
Protein sequence
MRSLSDIFEE YEFLDGDDRY RLLIELGREL EPMPDALKTD ATLVRGCSAS VWVYPVPRDD 
GRLHFLADSN AAITKGIVAL VLAAVQDKPA AEVADMDVAA ALAPFDLTRQ LSSNRTQGVP
NMIALVRDTA RRLAAG