| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0189 |
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| Symbol | glpD |
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| ID | 4082298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 198870 |
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| End bp | 200369 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638008548 |
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| Product | glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_615246 |
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| Protein GI | 103485685 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACA CTCCCCCACC CTATGACATC ATCGTCGTCG GCGGCGGGGT GAATGGCGCG
GGCGTCGCGC GCGATGCCGC GGGGCGCGGC GCGCGGGTGC TGCTGCTGGA GGCGGGCGAC
CTTGCGCAAG GCACCTCGTC GAAATCGACC AAGCTGATCC ACGGCGGGCT GCGCTATCTT
GAGCATTATG AGTTCACCCT CGTTCGCGAG GCGCTGAAGG AACGCGAGGT CTTGTGGAGC
ATCGCGCCGC ACATCATCCG TCCGATGCGC TTTGTCCTGC CCTATCGCGA CGGGCTGCGC
CCGCGCTGGT TGCTGCGGCT GGGGCTGTTC CTCTATGACC ATATCGGCGG GCGCAGGAAG
CTGCCCGGGA CGCGCTCGAT CGACCTCAGG CGCCATGTAG CGGGCGCGCC GCTGCAATCG
CATTATGTCC ATGGCTTTGA ATATTCGGAC GGCTGGGTCG ACGACGCGCG GCTGGTGCTG
CTCAACGCGC GCGATGCCGC CGATCGCGGC GCGCGCGTCC GCACGCGCAC GCGCGCCGAG
ATGCTGCGCT GCGACGGCGG GCTGTGGGTC GTCGACGCGG CGGACGATCA GGGGCATCGC
TATCGCTTCA CCGGCCGCAG CGTGGTCAAT GCCGCGGGGC CGGCGGTGCT CGACCTGTTG
AAACGCGCCG ATGCGGAGCC CGACCATCAG ATGCGCCTCG TGCGCGGATC GCACATCGTC
GTGCGCCGCC TGTTCGAGCA TCATTATTCC TATTTTTTCC AGCTGCCTGA CGGGCGCATC
TTCTTTGCCA TTCCCTATGA GCACGACTTC ACGCTGATCG GCACCACCGA CGTGGACCAT
GACGGACCCG CGAGCGAGGC GCAGGCGAGC GAGGCGGAAA TCGCCTATCT GTGCGAGGGC
GCGAGCCTCT ATTTCCGCAC CCCCGTCACC CCGGCCGACG TGGTGTGGAC CTATTCGGGC
GTGCGGCCGC TGGTCGAAGA CGGATCGGGG CGGCCCGAGG CGGCGACGCG CGGATACCGG
ATCGACCTCG ACATGGAAGA AGGCGCGCCG CTGCTCACCA TCTATGGCGG CAAAATCACC
AGCTATCGCC ATGTCGCCGA GGAGGCGGTC GACGCGCTCG CGCGCCATGT GCCGGCGCTG
ACGGGCAAGC ACTGGACGGC GAAGGCGGCG CTGCCCGGCG GCGATTTTCC GATGACCGGC
GCCGCGGCGC TGGCCGCCGA ATATCGATCC GCTCACCCCT TTCTCGCGGC GACGACCGCC
GAGCGGATCG CGCGCGCCTA TGGCACCGGG GCGCGGCGCT GGCTGGGCGA TGCGGGCGAC
TGGGACGCGC TGGGCGGCGA GATCGCGCAC GGCCTGAGCG TCGCCGAGGT CGAGTGGATG
GTCGAACAGG AATGGGCGCG CACGGCCGAC GATATTTTGT GGCGGCGGAG CAAGCTGGGA
CTCGTCTTCG GCGAGGAAGA CAAGGCGCGG TTTGCAGCGA CGCTGCGCGA ACTGCAATAG
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| Protein sequence | MADTPPPYDI IVVGGGVNGA GVARDAAGRG ARVLLLEAGD LAQGTSSKST KLIHGGLRYL
EHYEFTLVRE ALKEREVLWS IAPHIIRPMR FVLPYRDGLR PRWLLRLGLF LYDHIGGRRK
LPGTRSIDLR RHVAGAPLQS HYVHGFEYSD GWVDDARLVL LNARDAADRG ARVRTRTRAE
MLRCDGGLWV VDAADDQGHR YRFTGRSVVN AAGPAVLDLL KRADAEPDHQ MRLVRGSHIV
VRRLFEHHYS YFFQLPDGRI FFAIPYEHDF TLIGTTDVDH DGPASEAQAS EAEIAYLCEG
ASLYFRTPVT PADVVWTYSG VRPLVEDGSG RPEAATRGYR IDLDMEEGAP LLTIYGGKIT
SYRHVAEEAV DALARHVPAL TGKHWTAKAA LPGGDFPMTG AAALAAEYRS AHPFLAATTA
ERIARAYGTG ARRWLGDAGD WDALGGEIAH GLSVAEVEWM VEQEWARTAD DILWRRSKLG
LVFGEEDKAR FAATLRELQ
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