| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0168 |
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| Symbol | |
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| ID | 4082926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 169208 |
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| End bp | 171547 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638008527 |
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| Product | ATPase AAA-2 |
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| Protein accession | YP_615225 |
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| Protein GI | 103485664 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR02639] ATP-dependent Clp protease ATP-binding subunit clpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.152737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCCT TTTCGGAAAG CCTCGAAAAG ACCCTGCACA ACGCGCTGAA GGCCGCGTCG
GAACGTCACC ATGAATATGC GACACTCGAA CATCTGCTCT TCGCGCTGAT CGACGACGAT
CATGCCGCCG AAGTGATGCG CGCGTGCGGC GTCGCCCTGG GCGATCTGCA ATCGGCGGTC
GTTCACTATC TCGATACCGA ACTCGACAGC CTGAAGGTCG AGGGGCACAG TGATCCCAGC
CCCACCAGCG GATTCCAGCG CGTCGTGCAG CGCGCGATTC TGCATGTCCA GTCGTCGGGC
AAGGATGAAG TGACGGGCGC CAACGTCCTC GTCGCGCTGT TTTCAGAACG CGAAAGCTAT
GCGGTCTATT TCCTCCAGCA GCAGGATCTG ACGCGGCTCG ACGCGGTCTC CTATTTGAGC
CACGGCGTCG GCAAGGGCGG CAAACCCGCC GCGCAGGCCG AGCCCGAGGA GAAGGAAGAA
GCCAAGGACA AGGACAGCAG CGGCAAGAAC AAGAAGGAAA CCGCGCTCGA CCAGTTCACC
GTCAACCTCA ACGAAAAGGC GAAGACCGGC AAGGTCGATC CGCTGATCGG TCGCAGTGCC
GAGGTCGATC GCACGATCCA GATCCTTTGC CGCCGGTCGA AGAACAATCC GCTCTATGTC
GGCGATCCCG GCGTCGGCAA GACCGCCATC GCCGAAGGGC TCGCGCGCAA GATCATCGAG
GGCGACGTGC CCGAGGTGCT GCTGCCCGCG GTCATCTATT CGCTCGACAT GGGCGCGCTG
CTCGCGGGGA CGCGCTACCG CGGCGACTTC GAGGAGCGGC TGAAACAGGT CGTCACCGAA
CTCGAAGGGC TGCCGCACGC GATCCTGTTC ATCGACGAAA TCCATACCGT GATCGGCGCG
GGTGCGACGA GCGGCGGCGC GATGGACGCG TCGAACCTCT TGAAACCCGC GCTGTCGGGC
GGTGTGATCC GATGCATCGG CTCGACGACC TACAAGGAGT TCCGCAACCA TTTCGAAAAG
GACCGCGCGT TGCTGCGCCG CTTCCAGAAG ATCGACGTGG TCGAACCGAC GCTGGAGGAC
ACCAAGAAAA TCCTCGCCGG GCTGCGCAGC GCGTTCGAGG CGCACCATCA GGTCCGCTAC
ACCCCCGATG CGATCAACGC CGCGGTCGAC CTGTCGGCGC GCTACATCAA CGACCGCAAA
TTGCCCGACA AGGCGATCGA CGTGATCGAC GAGGTCGGCG CGATGCAGAT GCTGGTTGCC
CCGTCAAAGC GCAAGAAGAC GATCACCGCC AGGGAAATCG AAGCGGTGAT CGCGACTATG
GCGCGCATCC CGCCCAAATC GGTGTCCACC GACGACAAGG CGGTGCTTGC AAGCCTGGAG
ACGGACCTCA AGCGTGTCGT GTTCGGCCAG AACACCGCGA TCGAAGTGCT GTCGTCGGCG
ATCAAGCTGT CCCGCGCGGG GCTGCGCGAT CCCGAAAAGC CGATCGGCAA CTATCTGTTC
AGCGGCCCCA CCGGCGTCGG CAAGACCGAG GTTGCGAAGC AGCTCGCGTC GATCATGGGC
ATCCCGCTCC AGCGGTTCGA CATGAGCGAA TATATGGAAC GGCACAGCGT CTCGCGCCTG
ATCGGCGCGC CACCGGGCTA TGTCGGTTAT GACCAGGGCG GCCTGCTCAC CGATGCGATC
GACCAGAACC CGCATTGCGT GCTGCTGCTC GACGAGATCG AGAAGGCGCA TCCCGACCTG
TTCAACATCT TGCTTCAGGT GATGGACAAC GGCCGCCTGA CCGACCACCA CGGCAAGACG
GTCGACTTTC GCAACGTCAT CCTGATCATG ACGACCAACG CGGGCGCCAG CGACATGGCG
CGCGAATCGA TCGGCTTCGG CCAGCAGACG CGCGAGGATG CGCAGGAAGA AGCGGTGAAA
CGCATGTTCA CCCCCGAGTT CCGCAACCGC CTCGATGCGA TCGTGCCCTT CGGCTATCTG
CCGCCCGAGG TGGTCGCGCG TGTCGTTGAC AAGTTCATCC TTGAACTCGA GCTCCAGCTC
GCCGACCGCA ACGTGCATAT TCAGCTCGAC GACGCGGCGC GCGAATGGCT GACGGCGAAA
GGCTATGACA AGCTTTATGG CGCGCGGCCG ATGGGCCGCC TGATCCAGGA AAAGATCAAG
CAGCCGCTCG CGGAGGAGCT GCTGTTCGGC AAGCTCGTCC ATGGCGGCGA GGTCAAGGTG
AAGATGAAGA CCGGCGAGGA CGCCCATATC GGCAACCCGC TCGCTTTTGA AATCACCCCG
GCGGCGCCCA AGGGCGCCAA GGCCAAGGCG AAAGCCAAGC CGGCGAAGGC GGCCGAATAG
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| Protein sequence | MPSFSESLEK TLHNALKAAS ERHHEYATLE HLLFALIDDD HAAEVMRACG VALGDLQSAV
VHYLDTELDS LKVEGHSDPS PTSGFQRVVQ RAILHVQSSG KDEVTGANVL VALFSERESY
AVYFLQQQDL TRLDAVSYLS HGVGKGGKPA AQAEPEEKEE AKDKDSSGKN KKETALDQFT
VNLNEKAKTG KVDPLIGRSA EVDRTIQILC RRSKNNPLYV GDPGVGKTAI AEGLARKIIE
GDVPEVLLPA VIYSLDMGAL LAGTRYRGDF EERLKQVVTE LEGLPHAILF IDEIHTVIGA
GATSGGAMDA SNLLKPALSG GVIRCIGSTT YKEFRNHFEK DRALLRRFQK IDVVEPTLED
TKKILAGLRS AFEAHHQVRY TPDAINAAVD LSARYINDRK LPDKAIDVID EVGAMQMLVA
PSKRKKTITA REIEAVIATM ARIPPKSVST DDKAVLASLE TDLKRVVFGQ NTAIEVLSSA
IKLSRAGLRD PEKPIGNYLF SGPTGVGKTE VAKQLASIMG IPLQRFDMSE YMERHSVSRL
IGAPPGYVGY DQGGLLTDAI DQNPHCVLLL DEIEKAHPDL FNILLQVMDN GRLTDHHGKT
VDFRNVILIM TTNAGASDMA RESIGFGQQT REDAQEEAVK RMFTPEFRNR LDAIVPFGYL
PPEVVARVVD KFILELELQL ADRNVHIQLD DAAREWLTAK GYDKLYGARP MGRLIQEKIK
QPLAEELLFG KLVHGGEVKV KMKTGEDAHI GNPLAFEITP AAPKGAKAKA KAKPAKAAE
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