Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0122 |
Symbol | |
ID | 4082270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 118968 |
End bp | 119867 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638008481 |
Product | hypothetical protein |
Protein accession | YP_615179 |
Protein GI | 103485618 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTCGTTG CGGCGCAGGA TCTTGTCGTG CGGCGCCGAC CCGACAAGTT CATCGGGTTC GCGACGGCGG CTTGCTGGTC AGGGCTTCTG CTTGTTCCAC TGGCATGGAC CGCACCAGCT GTTTTCCATC TGTCCCCGGG CTACGACCAG CTGATCCAGG CTTTCCTGTT CGGGTGTCTT TACGGGATCG GCGCGTGGGC GAACCAGGCT TGCGGCTTTG GAACACTCGC GCATTTGACC GGCGGCAGGC TCGGATATCT TCTGACCCTC GCCGGCTGGG TAATCGGCGC CTCGTTCATA TCCAAAGTCT ACAGGCCCCA GCAAATTCCC GAGCCCTCGC TGCTTGCGAC GTCACCGCTC GCCGCGATAG CGGCGTGGCT GGCCTTCGCC GCAGTCTGCT GGTGGAGCTG GCCGCGCCTG CGACTGTTGC GCCGCCGGTC GCGCTGGCGC AAGATGCTGC TTGGACGCGC GCGGATGCGT CCCTTCGAGG CCATGCTCAT CATCGGCATC GGCGGCGGCC TGCTGTACGC CTGCGCCGGG AGCTGGACCT ATCTGGGCCT CCTGTCCAGC TACGCCTCGC AGCTCGTCAT GCACGATTTC GCCCCGATTT CTCCTTTGCC GGCGCTTTTG GGCACCGCGA TGATGATCGG CGGCGGACTA TTTGCAGCCG TCCGCTCCGC CAGCTTCCGG TTGCGCGGCA CCAACTGGCG TCAAGGCTCG CGGCATCTCG TCGGCGGCAC CATCATGGGG TTGGCCACCC AGCTCATCCC GGGCGGCAAT GGGGTCATCA TCGTCTACGG GCTGCCCTCC TTCGCTCCCC ATGCCCTGAC CGCCTATTTC GGGATGACAT TGACCCTCAT GCTCATCTTC GCCGCCACAA ACTATTCCCG CAGGGCATAG
|
Protein sequence | MVVAAQDLVV RRRPDKFIGF ATAACWSGLL LVPLAWTAPA VFHLSPGYDQ LIQAFLFGCL YGIGAWANQA CGFGTLAHLT GGRLGYLLTL AGWVIGASFI SKVYRPQQIP EPSLLATSPL AAIAAWLAFA AVCWWSWPRL RLLRRRSRWR KMLLGRARMR PFEAMLIIGI GGGLLYACAG SWTYLGLLSS YASQLVMHDF APISPLPALL GTAMMIGGGL FAAVRSASFR LRGTNWRQGS RHLVGGTIMG LATQLIPGGN GVIIVYGLPS FAPHALTAYF GMTLTLMLIF AATNYSRRA
|
| |