Gene Sala_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0122 
Symbol 
ID4082270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp118968 
End bp119867 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content65% 
IMG OID638008481 
Producthypothetical protein 
Protein accessionYP_615179 
Protein GI103485618 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGTTG CGGCGCAGGA TCTTGTCGTG CGGCGCCGAC CCGACAAGTT CATCGGGTTC 
GCGACGGCGG CTTGCTGGTC AGGGCTTCTG CTTGTTCCAC TGGCATGGAC CGCACCAGCT
GTTTTCCATC TGTCCCCGGG CTACGACCAG CTGATCCAGG CTTTCCTGTT CGGGTGTCTT
TACGGGATCG GCGCGTGGGC GAACCAGGCT TGCGGCTTTG GAACACTCGC GCATTTGACC
GGCGGCAGGC TCGGATATCT TCTGACCCTC GCCGGCTGGG TAATCGGCGC CTCGTTCATA
TCCAAAGTCT ACAGGCCCCA GCAAATTCCC GAGCCCTCGC TGCTTGCGAC GTCACCGCTC
GCCGCGATAG CGGCGTGGCT GGCCTTCGCC GCAGTCTGCT GGTGGAGCTG GCCGCGCCTG
CGACTGTTGC GCCGCCGGTC GCGCTGGCGC AAGATGCTGC TTGGACGCGC GCGGATGCGT
CCCTTCGAGG CCATGCTCAT CATCGGCATC GGCGGCGGCC TGCTGTACGC CTGCGCCGGG
AGCTGGACCT ATCTGGGCCT CCTGTCCAGC TACGCCTCGC AGCTCGTCAT GCACGATTTC
GCCCCGATTT CTCCTTTGCC GGCGCTTTTG GGCACCGCGA TGATGATCGG CGGCGGACTA
TTTGCAGCCG TCCGCTCCGC CAGCTTCCGG TTGCGCGGCA CCAACTGGCG TCAAGGCTCG
CGGCATCTCG TCGGCGGCAC CATCATGGGG TTGGCCACCC AGCTCATCCC GGGCGGCAAT
GGGGTCATCA TCGTCTACGG GCTGCCCTCC TTCGCTCCCC ATGCCCTGAC CGCCTATTTC
GGGATGACAT TGACCCTCAT GCTCATCTTC GCCGCCACAA ACTATTCCCG CAGGGCATAG
 
Protein sequence
MVVAAQDLVV RRRPDKFIGF ATAACWSGLL LVPLAWTAPA VFHLSPGYDQ LIQAFLFGCL 
YGIGAWANQA CGFGTLAHLT GGRLGYLLTL AGWVIGASFI SKVYRPQQIP EPSLLATSPL
AAIAAWLAFA AVCWWSWPRL RLLRRRSRWR KMLLGRARMR PFEAMLIIGI GGGLLYACAG
SWTYLGLLSS YASQLVMHDF APISPLPALL GTAMMIGGGL FAAVRSASFR LRGTNWRQGS
RHLVGGTIMG LATQLIPGGN GVIIVYGLPS FAPHALTAYF GMTLTLMLIF AATNYSRRA