Gene Sala_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0119 
Symbol 
ID4082267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp116111 
End bp116647 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content65% 
IMG OID638008478 
ProductMarR family transcriptional regulator 
Protein accessionYP_615176 
Protein GI103485615 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.855711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTGA CCAAGGACGC TTCACCTTCC GATCGGCTGA TCAATCTCTT CGGCGCCCTC 
GCGCAGGGGG TGTCGGATGA GATGCGCGGT GCGATATCAC AGCGCTTTCC GGCCGGCGGG
GAGACCGCGG CGGCATTGAG CCTCATCGGC CATGAACCGG GCCTTTCGAT CGACCAGATC
GGCAAGGCCC TGCGCCTGTC GCATGCCGGT GCTGCCCGCG TGGTCGAACG GCTGGTCGCT
CAGAATTTCG TCTCGAAATC GCAATCCCCC GGCGATCGCC GCGTCATGCA CGTGTCGTTG
ACGTCCGGCG GCGAGACGGA ACGCAGGGCG CTCCTGAATC TGCGCAGCAC AGCGATCACC
GGGTTGCTCG CTGCGGTCGG CGAGAAGGAC CGCGCTGCGC TGGAGCGCGT CGCGGAAACC
ATCCTCGCGT CATTGCCGCG CGACGAAGTG CGCGCGCGCA CGACCTGCCG TTTCTGCGAC
GAAGAGAAGT GCACCAACTG TCCGACCGAC ATCGTCGGTC CCGGAATTAC AAACTGA
 
Protein sequence
MRLTKDASPS DRLINLFGAL AQGVSDEMRG AISQRFPAGG ETAAALSLIG HEPGLSIDQI 
GKALRLSHAG AARVVERLVA QNFVSKSQSP GDRRVMHVSL TSGGETERRA LLNLRSTAIT
GLLAAVGEKD RAALERVAET ILASLPRDEV RARTTCRFCD EEKCTNCPTD IVGPGITN