Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0119 |
Symbol | |
ID | 4082267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 116111 |
End bp | 116647 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638008478 |
Product | MarR family transcriptional regulator |
Protein accession | YP_615176 |
Protein GI | 103485615 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.855711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTGA CCAAGGACGC TTCACCTTCC GATCGGCTGA TCAATCTCTT CGGCGCCCTC GCGCAGGGGG TGTCGGATGA GATGCGCGGT GCGATATCAC AGCGCTTTCC GGCCGGCGGG GAGACCGCGG CGGCATTGAG CCTCATCGGC CATGAACCGG GCCTTTCGAT CGACCAGATC GGCAAGGCCC TGCGCCTGTC GCATGCCGGT GCTGCCCGCG TGGTCGAACG GCTGGTCGCT CAGAATTTCG TCTCGAAATC GCAATCCCCC GGCGATCGCC GCGTCATGCA CGTGTCGTTG ACGTCCGGCG GCGAGACGGA ACGCAGGGCG CTCCTGAATC TGCGCAGCAC AGCGATCACC GGGTTGCTCG CTGCGGTCGG CGAGAAGGAC CGCGCTGCGC TGGAGCGCGT CGCGGAAACC ATCCTCGCGT CATTGCCGCG CGACGAAGTG CGCGCGCGCA CGACCTGCCG TTTCTGCGAC GAAGAGAAGT GCACCAACTG TCCGACCGAC ATCGTCGGTC CCGGAATTAC AAACTGA
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Protein sequence | MRLTKDASPS DRLINLFGAL AQGVSDEMRG AISQRFPAGG ETAAALSLIG HEPGLSIDQI GKALRLSHAG AARVVERLVA QNFVSKSQSP GDRRVMHVSL TSGGETERRA LLNLRSTAIT GLLAAVGEKD RAALERVAET ILASLPRDEV RARTTCRFCD EEKCTNCPTD IVGPGITN
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