| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1774 |
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| Symbol | |
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| ID | 6332534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1832711 |
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| End bp | 1833991 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 642658047 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001931923 |
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| Protein GI | 188997672 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTATAT GGTATAATTA TGCTATGGGG ATATTAGATA TATTCAAGAA AAACAAAGAA
GGAATAGAAC CTAAATATAT AGATAAAATA ACTGGTGTTT ATAATAAAAA CTATATTTCT
GAAATAGAAA AAAATTTCCA TAAACTTAAT TTTGCTGTAA TTTTGCTGGA TTTGGATAAT
TTTTCAAATA TTCATAAAGG TTATGGAAAA GACATAGCAG ATTTATTGCT ACAAGATGTA
GTTAAAATAA TTAAAAATAA TATTAGAGAA GAAGATATAA TTATTCGAAT AGGAGATGAT
GAATTCTTAA TTTTAGTTAA AAAATTTGAT GATAATACAA ACCCGTTAGG TATTACAGAG
AGAATTATAA ATAAAATATC TTTAAATAAA TTTAATTTAA TTAACAACAC GGTAAAAATA
ACCGCATCTG CTGGTATTTA CTTATATCCA GAAAAGGAAA CCGATTTTTC ATTAGCCTTA
AAAAAAGCTG ATACTGCATT ATTGAAAGCA AAACAAAAAA GAAATACTGT TGAGATTTAT
TCTGATGGTT TGGAATATAG AACCGATAAG AGGCTAACAG ATGTAAAGAT AGCAATTGAA
GAAAAAAGAT TAATTTGTTA TTATCAGCCT ATTTTTGATA TGGAAACTAT GAAAACTATA
AAATTTGAAG CATTAGTAAG AATAATCTCT CCAGAGAGAA AGATTATAGT GCCAAATTTG
TTTTTAGCAT CAATTAAAAA TACTTATGTT TATAAAGAAC TTACAAAAAA AATAATTGAG
TTTAATCTCT TTATTGTAAG GACAAAGAAA ATAAAAGTAA GTATCAACTT ATTGCCATCA
GATATTTTAG ATATTGATAT TATAAATTTT CTAACTTCAT TAAGCAAAGA TTTTACCTCA
ATGATTACAC TTGAAATCTT AGAATCAGAG AGTGTTGACG ATTATGGAAA ATTAAGAGAA
AATTTACAGA TATTGAAAAA AGCTGGATAC GAGATAGCCT TAGACGATTT TGGCTCAGGA
TTTTCTAATA TTTTACACTT AATAGAACTT CAACTCGATT ATTTAAAAAT AGATGGTCAG
ATAATAAGAA AGATAGATAA AGACCCTATA TCTTACACTG CTGTAAAAGC AATAAAAAGC
TTGACCAAGG AGATAAATAT AAAAACCATT GCAGAATTCG TATCTAACAA AGAAATTTAT
GATAAGTTAA AAGAAATTGG AATAGACTAT GGTCAAGGAT TCTATTTTAA AGAACCTTTG
CATCCTTCTG AAATAAGATA A
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| Protein sequence | MFIWYNYAMG ILDIFKKNKE GIEPKYIDKI TGVYNKNYIS EIEKNFHKLN FAVILLDLDN
FSNIHKGYGK DIADLLLQDV VKIIKNNIRE EDIIIRIGDD EFLILVKKFD DNTNPLGITE
RIINKISLNK FNLINNTVKI TASAGIYLYP EKETDFSLAL KKADTALLKA KQKRNTVEIY
SDGLEYRTDK RLTDVKIAIE EKRLICYYQP IFDMETMKTI KFEALVRIIS PERKIIVPNL
FLASIKNTYV YKELTKKIIE FNLFIVRTKK IKVSINLLPS DILDIDIINF LTSLSKDFTS
MITLEILESE SVDDYGKLRE NLQILKKAGY EIALDDFGSG FSNILHLIEL QLDYLKIDGQ
IIRKIDKDPI SYTAVKAIKS LTKEINIKTI AEFVSNKEIY DKLKEIGIDY GQGFYFKEPL
HPSEIR
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