| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1642 |
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| Symbol | |
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| ID | 6332525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1698826 |
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| End bp | 1700436 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642657917 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_001931794 |
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| Protein GI | 188997543 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0112721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTATAA ATAAAGAAGT AATAATAAAC AAAATAAAAG AAATATTTCA GGATAAAGCT
AAGCAAAAAT ACATTATTGG TGGTCTTGTA GGATTATTTT TAATTATTCT TATAGCAATA
CTGATTACAA AGAATTTGCA TAAAGAAGAT TATGCTGTTT TATATTCAGG TTTAGCTCCG
GATGATGCCG GCAATATTCT TACTGCTTTA TCACAAGAAA ACATACCTTA TAAATTAGAA
GGCAATGGAA CTATAATCAT GGTTCCAAAA GATAAAGTTT ATGATGCTCG TTTAAAGTTG
GCTGCAAAGG GATTGCCTTC CGGAAAAGTT GTAGGATTTG AGATTTTTGA AGAACCAAAG
CTCGGAACAA CGCAATTTCA AGAAAACGTT AACTATATAA GAGCAGTAGA AGGGGAATTA
ACAAGAACGA TCAAACAGTT AGATGCTGTG ATGGATGCAA AGGTAAATAT AGCCCTTCCT
AAGGATTCTA TTTTTGTCAG GCAAGAAGAC GAAGCAAAAG CATCTGTAAT TATAAAACTC
TGGCCAGACA AAGACTTAAC AAAAGAGCAA ATTAAAGCTA TTGTATTTTT AGTTTCTCGT
GCTGTACCGA ACTTAAAACC AGAAAATGTA ACAGTTGTAG ATAATAGAGG TAGGGTTCTT
TCTGATTTAA TAGATGAAGA ATCAGCCAAC GAATCCGGAG ACAAAACCGT TGACTTAAAA
AGAAAATTAG AAAGGCAGCT TGAAAAAGAT ATTCAGTCTA TGCTTGCTAA GGTAGTAGGT
CCGGAGAGAG TAGTAGTTAA AGCCAGCGTA GAGCTTGAAA CAGGAAAAGT TCATCAAAAA
GATGAAATCT ATGACCCGGA TAAAGTAGCG GTAGTTAGCG AGAGAAAAAT TAAGGAATCG
GAAACAGAAG AATCTCAAAC AATAAACGCA CCACCTGGTA CACCAACAAA CGTTCCCCCT
GTAATGAATA CGCCTGTAAT GGGTGGGGGA GGAAAGAAAA AAGAAAAGAG TGATATAACA
ACAAATTACG ATGTTTCTAA ATCAATGATA GAAACACAAA AACCACTGTT TACTATTAAA
AAAGTAAGCG TTGGTGTTAT GATTGATGGA AAGTATAAAG AAATTAAAGA TAAGGATGGC
AATATAATAA AACAATTTGA GCCAAGAAGT CAGCAAGAAC TACAATCCTA TGAAAATTTA
ATCAAAAGTG CTATAGGATT TGACCCAAAC AGAGGAGATC AAGTTACCGT AATCAGCGTT
CCATTTGAAG CTACCTCCAC GCAGGAAGAA GTATCTACTA AACAGCAAAA TTTAATAATG
TATGTAATTG CAGGAATATT ACTTTTACTT ATACTAGGTT TATTAGCGTT TATTTTTATC
AAAAAGAAAA AACAGAAAAA AGAAGAAATT ATTACTGCTA CTACTCTTTC AGCACCATTA
GCCGGGGTTG CTGCTGAAGC ATTAGCAAAA AAATATGAAG AAGAAAAAAG TTTAGTGTCG
GAAATAGAAA AATTACCTGA ATATCTAAAA ATATTAGAAA TAGCCGAAGA AAATCCTCAA
ATGATAGCTA ATATCATAAC AAAATGGATT AAAGAAGATG CTAAAAAATG A
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| Protein sequence | MAINKEVIIN KIKEIFQDKA KQKYIIGGLV GLFLIILIAI LITKNLHKED YAVLYSGLAP
DDAGNILTAL SQENIPYKLE GNGTIIMVPK DKVYDARLKL AAKGLPSGKV VGFEIFEEPK
LGTTQFQENV NYIRAVEGEL TRTIKQLDAV MDAKVNIALP KDSIFVRQED EAKASVIIKL
WPDKDLTKEQ IKAIVFLVSR AVPNLKPENV TVVDNRGRVL SDLIDEESAN ESGDKTVDLK
RKLERQLEKD IQSMLAKVVG PERVVVKASV ELETGKVHQK DEIYDPDKVA VVSERKIKES
ETEESQTINA PPGTPTNVPP VMNTPVMGGG GKKKEKSDIT TNYDVSKSMI ETQKPLFTIK
KVSVGVMIDG KYKEIKDKDG NIIKQFEPRS QQELQSYENL IKSAIGFDPN RGDQVTVISV
PFEATSTQEE VSTKQQNLIM YVIAGILLLL ILGLLAFIFI KKKKQKKEEI ITATTLSAPL
AGVAAEALAK KYEEEKSLVS EIEKLPEYLK ILEIAEENPQ MIANIITKWI KEDAKK
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