| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1585 |
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| Symbol | hslU |
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| ID | 6331116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1636731 |
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| End bp | 1638077 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642657860 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_001931737 |
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| Protein GI | 188997486 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.157035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAAATAG ACAAAGAGCT TACACCTAAA CAGATAGTTG AGGAGCTAAA TAAATACATA
GTTGGTCAGT ATGAAGCCAA AAAGGCAGTT GCAGTAGCGC TTAGAAATAG ATGGAGAAGG
CAAAAATTAC CAGAAGATCT AAGAGATGAA GTAATTCCAA AAAATATACT TATGATAGGA
CCTACAGGAG TAGGTAAAAC TGAAATTGCA AGGAGACTGG CAAATTTAGT AAAAGCACCA
TTTATAAAAG TAGAAGCAAC AAAATTTACA GAAGTTGGAT ACGTTGGAAG AGATGTTGAA
TCTATCATAA GAGAGCTTGT TGACGTATCT TTCAAGATGG TAAAAGCTGA AAAGATGGAA
GAAGTAAGAG AAAAGGCAAA AGCTATAGCA GAAGAAAAGA TATTAGACTA TTTAGTGCCT
AAAAAACCAA AAAGGTATGG AACACTTATT GAGGAAGAGG AAGAATCGCC GGCAAGAGAA
AAATTTAGAG AAATGCTAAA AAACGGTCAA TTGGATGATA AAGTTGTAGA AATAGATGTA
GAAGAAAAAG TCTCAGCGGT TGTTGGAGGT GTAGTTGTTC CGGGTCTTGA AGATATTGAA
AGCCAGCTAA AAGAATTATT TTCAAATTTA GGACCATCAA AAAGAAAAAA AAGAAGATTG
ACGGTCAAGG AAGCGTTGAA AATTATAGAA AACGAAGAAG CAGAAAAACT TATAGATATG
GATGAAGTCC AAACCTTAGC AGTAAAAAGA GCAGAAAACT TAGGAATAGT ATTTATTGAT
GAAATTGATA AAGTGGCAGC AAGAGGATCA TCAAAAAGCG GTCCTGATGT ATCAAGAGAA
GGAGTGCAAA GAGATTTACT TCCAATAGTA GAAGGAACTG TTGTTTCAAC AAAATACGGA
CCAGTCAAAA CAGACCATAT TTTATTTATA GCAGCAGGAG CATTTCATTT AGCAAAACCT
TCAGATTTAA TTCCAGAATT ACAAGGAAGA TTTCCAATAA GAGTAGAGCT CAAAGCACTT
ACAAAAGATG ATTTTGTCAA AATTTTAACA GAACCAAAAA ATGCATTGAT AAAACAGTAT
ATAGCTTTAA TGTCTACAGA AGGTGTTGAA CTTGAATTTA CAGAAGATGC AATTCAAGAA
ATAGCACAAA TAGCAGAAGA AGTAAACGAA AGAACAGAAA ACATTGGAGC AAGAAGACTT
CATACAATAT TAGAAAGAAT AATGGAAGAT TACTCATTTA ATGCACCAGA TTTAAAAGGA
CAGAAAATTG TGATAGATAG TAAATTAGTT AGAGAAAAAC TTGGTAATGT GATTACAAAT
GAAGATTTAA CAAGATATAT ATTATAA
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| Protein sequence | MEIDKELTPK QIVEELNKYI VGQYEAKKAV AVALRNRWRR QKLPEDLRDE VIPKNILMIG
PTGVGKTEIA RRLANLVKAP FIKVEATKFT EVGYVGRDVE SIIRELVDVS FKMVKAEKME
EVREKAKAIA EEKILDYLVP KKPKRYGTLI EEEEESPARE KFREMLKNGQ LDDKVVEIDV
EEKVSAVVGG VVVPGLEDIE SQLKELFSNL GPSKRKKRRL TVKEALKIIE NEEAEKLIDM
DEVQTLAVKR AENLGIVFID EIDKVAARGS SKSGPDVSRE GVQRDLLPIV EGTVVSTKYG
PVKTDHILFI AAGAFHLAKP SDLIPELQGR FPIRVELKAL TKDDFVKILT EPKNALIKQY
IALMSTEGVE LEFTEDAIQE IAQIAEEVNE RTENIGARRL HTILERIMED YSFNAPDLKG
QKIVIDSKLV REKLGNVITN EDLTRYIL
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