Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1547 |
Symbol | |
ID | 6332065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1589836 |
End bp | 1590585 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642657822 |
Product | ABC-3 protein |
Protein accession | YP_001931699 |
Protein GI | 188997448 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000000363711 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATA TTTTAGTACC TGCATTGACT TTATCCATAG TTTTATTGGT TATCCATTCT TACTTTGGAA TAGAAATAAT AAAAAGAGGG ATAATCTTTA CTGATTTATC TATTGGACAA ATGGCTGCTG CAGGAGCGGC AGTCTCTCTT TTCTTTTTTG AAGGTCAGTA TAGATATTTA ATCTCACTAT CTTTTGCACT AATAACAGCT ATTTTAATAA CGTTTGCAAC AAAAAAAGAA AAAGTTTCCG TAGAGGGCTT TATTGGACTG ATTTATGCTC TTGGAATTTC TTTAATATTT ATTATTATGT CAAAATCGCC TCACGGTCTT GAGGAGTTAA ACAATCTGCT TGCATATGAT ATCTTGTTTG TAAATATGAC AGAGGTTTAC AAAACAGCTA TTTTATATAC AGTCTTAGGA TTGTTTTTAT TTGTGATTAA CAGATTTACG GTAGGATTTA TAAAAGAGAT GTTATTTTTT TCTGTATTTT CAATTACAAT CACAAGTTCA GTTTCATTAG CCGGCGTATT TGTCGTCTTT TCTCTCTTGA TAGCTCCGGC GTTTACGGTT ATGCAGTTTT TCTCTAAAAA TTTAATTGTT TATGCTGTGA TTTTAGGTAG TTTAATCAAT CTTTTGGCAG TGTATTTATC TTATAACTTT GACTTGCCAA CAGGCTACAC TATCGTATTT TCTCAAACTT TTTTAGCGAT ATTGTCTTCT GTAATCTCAT TTTTAAGAAG GTCTCACTGA
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Protein sequence | MSDILVPALT LSIVLLVIHS YFGIEIIKRG IIFTDLSIGQ MAAAGAAVSL FFFEGQYRYL ISLSFALITA ILITFATKKE KVSVEGFIGL IYALGISLIF IIMSKSPHGL EELNNLLAYD ILFVNMTEVY KTAILYTVLG LFLFVINRFT VGFIKEMLFF SVFSITITSS VSLAGVFVVF SLLIAPAFTV MQFFSKNLIV YAVILGSLIN LLAVYLSYNF DLPTGYTIVF SQTFLAILSS VISFLRRSH
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