Gene SYO3AOP1_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1493 
Symbol 
ID6332289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand- 
Start bp1538933 
End bp1539562 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content30% 
IMG OID642657771 
Productendonuclease III 
Protein accessionYP_001931649 
Protein GI188997398 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.319133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTTA CACAGCAGCA GTTAATAGAA CGATTAAAAA AACATTTTCC TGACCCAAAG 
ATAGAGTTAA ATTATGAAAA TGAATTTCAA CTATTGATTG TCATCATTCT GTCAGCACAG 
ACTACTGATA AAAAAGTCAA TCAGGTTTCT CCAATTTTAT TCAAAAAATA TCCAACCCCC 
CAAGCCCTTG CAAACGCAGA TTTAAAAGAT CTTGAAGAAA TAATAAAGCC ACTTGGTTTT 
TATAAAAGAA AAGCAAAACT TATAAAAGAA TGTGCTAAAG CAATTTTAGA AAAATTCAGC 
GGACAAATTC CAAAAACATT AGAAGAATTA ACATCTCTTC CTGGCGTTGG GAGAAAAACA 
GCATCGGCAT TACTTGTAAA TGCTTATAAA ATTCCTGCAA TTGTAGTAGA TACACATGTT 
AAGAGAGTTG CAAAAAGATT AAAAATAACT AATCAAACTA GTCCAGAAAA AGTAGAGAAA 
GATTTAACTA AATTCTTTTC AAAAGAAAAT TGGGTTTATA TCTCAAATGC CTTAGTGTTA 
TTTGGTAGAT ACATTTGTAC TGCAAACAAA CCAAAATGTA AAGAATGCTA TGTTTCTGAT 
ATCTGTCCTT ATGAAAAAAA GAACTTGTGA
 
Protein sequence
MAFTQQQLIE RLKKHFPDPK IELNYENEFQ LLIVIILSAQ TTDKKVNQVS PILFKKYPTP 
QALANADLKD LEEIIKPLGF YKRKAKLIKE CAKAILEKFS GQIPKTLEEL TSLPGVGRKT 
ASALLVNAYK IPAIVVDTHV KRVAKRLKIT NQTSPEKVEK DLTKFFSKEN WVYISNALVL 
FGRYICTANK PKCKECYVSD ICPYEKKNL