Gene SYO3AOP1_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1350 
Symbol 
ID6331216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1386353 
End bp1387117 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content31% 
IMG OID642657633 
Productprotein of unknown function DUF62 
Protein accessionYP_001931512 
Protein GI188997261 
COG category[S] Function unknown 
COG ID[COG1912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0963991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATAA TAGCACTGCT TACAGATTTT AGCTTAAAAG ACGGATTTGT TGGCTCAATG 
AAAGGAGTTA TTTTGTCTAT AAATCCAGAG GTTAAAATTG TTGATATATC CCACGAGATA
GAGTCATTTA ACATAATAGA ATGTAGTATA GTTTTAAATG CAACTTACAG ATATTTTCCT
AAAGGTACAA TTTTTGTGTC TGTGGTTGAC CCCGGAGTTG GAACAGAAAG AAAGCCTATA
ATTGTAAAAA CAAAAGATTA CTTTTTTGTA TGCCCAGACA ATGGCCTGCT TACACTTGTT
TTGAAAAAAG AAAGAATAGA AAAGATGGTA GAAATCAAAA ATAAAGAATT TTTCTTAGAA
TCAGACACTA ACACATTTCA TGGTAGAGAT ATATTTGCTC CTGTGGCTGC TTTTTTAAGC
AAAGGGATTA AGCCGGAAAA ATTCGGTGAT GAGATTAAGA ATATAAAAAC TAATGATATA
TTTGAGCCAA AAGTATTTGA TGGTCGTATA ATCGGAAAAA TAATAAAGTT TGATAAATTC
GGAAACGCTA TCACAAATAT TGAAAAACTG CCAGAAAGAT TTGAAATTAT ATACAAAGAC
TATAGAATAA CAAAGGTATG TAGAAACTTT TTAGAAGGAG AAAAAGGCAA GCCAAACCTA
ATCAAAGGAA GTTTTGGATT TTATGAGCTT TTCCTTCCAA TGGACAGCTT TAAAGTTAAA
TTTAATGCAA GACTATTTGA AGAGTTTGAA ATCTTAAGCA AATAA
 
Protein sequence
MSIIALLTDF SLKDGFVGSM KGVILSINPE VKIVDISHEI ESFNIIECSI VLNATYRYFP 
KGTIFVSVVD PGVGTERKPI IVKTKDYFFV CPDNGLLTLV LKKERIEKMV EIKNKEFFLE
SDTNTFHGRD IFAPVAAFLS KGIKPEKFGD EIKNIKTNDI FEPKVFDGRI IGKIIKFDKF
GNAITNIEKL PERFEIIYKD YRITKVCRNF LEGEKGKPNL IKGSFGFYEL FLPMDSFKVK
FNARLFEEFE ILSK