Gene SYO3AOP1_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1294 
Symbol 
ID6331901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1333770 
End bp1334207 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content33% 
IMG OID642657578 
Producthypothetical protein 
Protein accessionYP_001931458 
Protein GI188997207 
COG category[S] Function unknown 
COG ID[COG5502] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0137379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCACT TCGAAAAATT TTCAGCAAAA GGAAATGAAT TTCTGAAGGA TTTAGCTCAA 
GAAATTGGGG AGCCTGAAAA CAGAGAAAAG GCTTACAGAG TATTAAGAAC TGTCTTACAT
GTTTTAAGAA GAAGGTTAGG TTTAGATGAA TCTTTTGACT TATTAGCACA ACTACCAATG
TGTATTAAAG CTGTTTACGT TGATGGATGG AAACCTACCC TATTTCCAGA TAAATCAATC
AAAACAGTAG AAGATTTTAT TCGCGAAGTT TTAGAAGAAG ACAAAAGGTC TGCAGGTAAA
GATTTTGGGA ATGAAGAACA TGCAAAACAA GTTATAAAAG CGGTGTTTAG AGTTCTTAAG
AAACATGTAA CTGAAGGAGA GATTGAAGAT ATTATCGGAG ATTTACCAAA ACACTTAAAA
GAACTTTTTG CAGATTAA
 
Protein sequence
MHHFEKFSAK GNEFLKDLAQ EIGEPENREK AYRVLRTVLH VLRRRLGLDE SFDLLAQLPM 
CIKAVYVDGW KPTLFPDKSI KTVEDFIREV LEEDKRSAGK DFGNEEHAKQ VIKAVFRVLK
KHVTEGEIED IIGDLPKHLK ELFAD