| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1293 |
|---|
| Symbol | |
|---|
| ID | 6331900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 1333007 |
|---|
| End bp | 1333489 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642657577 |
|---|
| Product | cytochrome c' |
|---|
| Protein accession | YP_001931457 |
|---|
| Protein GI | 188997206 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00247418 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCCT ATTTATCAAC TATTGCTTTA TTATTAATTG GAATAGTTAG CTTTTCTTAT
TCGGATGAAT TTAAAGTTAA ACCTGATGTT TACAGAAATT GGCATCATGT AAAAAGTATG
GTTATATTTG ATGAAAAACA TCCTCTGTAC AACCCATTTA ATGGTATCCA TCACGTATAC
GTTAATGACA AAGGATTAAA TTCAATTAAA AATCAAAACA ATAGAAAATT TCCTGACGGA
ACAAAAATAG CGATTGTATT TTACGAACAT GTAAATTCAA ATGGAGCATT TATTGAAGGA
GCGAAAAGAA TTGAAGCATT TATGGTGAAA GATTCTAAAA AATTTAAATC AACTGATGGT
TGGGGTTATT ACGGATATGA TGGCAATGGT AAAAATCTTA TAAAAGATAT GAGTAAAGAT
TGCCATTCTT GTCACATGCA GGCAAAAGAT AAAGATTTTG TATTTTCTAT TTGGACAAAA
TGA
|
|---|
| Protein sequence | MKSYLSTIAL LLIGIVSFSY SDEFKVKPDV YRNWHHVKSM VIFDEKHPLY NPFNGIHHVY
VNDKGLNSIK NQNNRKFPDG TKIAIVFYEH VNSNGAFIEG AKRIEAFMVK DSKKFKSTDG
WGYYGYDGNG KNLIKDMSKD CHSCHMQAKD KDFVFSIWTK
|
|---|
| |