Gene SYO3AOP1_1291 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1291 
Symbol 
ID6331898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1331346 
End bp1332446 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content29% 
IMG OID642657576 
Productpeptidase M50 
Protein accessionYP_001931456 
Protein GI188997205 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00117198 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCTA TACCGTTATT TAAAATTTTT GGAATTCAAG TATATATAGA TTATAGCTGG 
TTTATAGCCT TTACTTTGAT AACATTAACT TTATCTCAAG GATTTTATCC TATGCTTTAT
AAAAATCTCA GTCAATTTGA ATATATATTA GCCGGAGCAG TTTCTGCTAT TATGCTTTTT
TTATCCGTTT TACTTCATGA ACTTTCTCAT TCTCTTGTAG CCATAAAACA CGGCATACCA
GTTCGGGATA TTTATCTTTT TATCTTTGGC GGGGTAGCAA TGATAGAACA AGAACCAGAC
TCCCCTTCTA CAGAGTTTAA AATTGCAATA GCCGGTCCTC TTATGAGCTT TTTCTTAGCA
TTAATATTTT TTACTGCAAT AAGTCTATAT CCAATAGATG ATATTTTCAA TGGTTTTTTA
AACTATATGT TTATGGTAAA TTTTGCTCTT GGAGCGTTTA ACTTAATCCC GGCATTTCCG
CTTGATGGTG GTCGTATTTT AAGATCCATT TTATGGAAGA AGTATGGAAT TCTAAAAGCA
ACAGAAGTAG CTTCTAAATT TGGAAAATAT TTTGGTTTTA TGCTTATTGG TTTTGGAATT
TACTCTTTAT TCAATGGAAA CTTGATTAAC GGCTTTTGGC TTATATTCTT AGGAACTTTT
ATAATAAAAG CTTCCAAGGA TGCTCTATTT AATACTAAAT TAGCTGTTTT ATTATCCAAG
CTTAAAGTCT TTAATATTAT GCATACAATG AATCCATTAG ATGAAAATCT AAGCATCTTA
GATTTTAGTA TGTTTTATAG ACCTTATATA AGGACTTATT TATATCCTGT CTTGACCTCC
GATGGAAGAA TTTTATTTAT AGACACAAGA GACTTAGATA AAATTCCGTA CTTTAAACAA
GAAGAGATGA CTTTAAAAGA TATAGTAAAA CCAATAAAAT ATTATGTCCT TCCGGAAGAA
AGGTTATCAA AAGTTTATAA TCTTTTAAAA AGAAATAAAT TAGAAGAAAT TCCTGTTATT
GATAATAATA CTTTTCTTGG AATTTTAAGA AAATCAGATA TTGAAGCTAT TCTTAACAGA
TTTATCCATG AAGTGAAATG A
 
Protein sequence
MNAIPLFKIF GIQVYIDYSW FIAFTLITLT LSQGFYPMLY KNLSQFEYIL AGAVSAIMLF 
LSVLLHELSH SLVAIKHGIP VRDIYLFIFG GVAMIEQEPD SPSTEFKIAI AGPLMSFFLA
LIFFTAISLY PIDDIFNGFL NYMFMVNFAL GAFNLIPAFP LDGGRILRSI LWKKYGILKA
TEVASKFGKY FGFMLIGFGI YSLFNGNLIN GFWLIFLGTF IIKASKDALF NTKLAVLLSK
LKVFNIMHTM NPLDENLSIL DFSMFYRPYI RTYLYPVLTS DGRILFIDTR DLDKIPYFKQ
EEMTLKDIVK PIKYYVLPEE RLSKVYNLLK RNKLEEIPVI DNNTFLGILR KSDIEAILNR
FIHEVK