| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1170 |
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| Symbol | |
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| ID | 6332681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1216051 |
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| End bp | 1218432 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642657452 |
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| Product | DNA topoisomerase (ATP-hydrolyzing) |
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| Protein accession | YP_001931336 |
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| Protein GI | 188997085 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000163791 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGATA TTAAAAAAGT TCCGATAGAA GAGGAAGTTA AAAGTGCTTA TATAGATTAT
GCAATGTCGG TTATTGCTGG TAGGGCCATT CCGGATGTTA GAGATGGCTT AAAACCAGTT
CAAAGAAGAA TTTTATACTC TATGTATGAG CTGGGTTTAC TTCCAAACAA ACCATATAAA
AAGTCTGCAA GAGTTGTAGG GGAAACACTT GGTAAATTCC ATCCACATGG TGATGCGTCT
GTTTATGATG CACTTGTAAG AATGGCACAA GATTTTACAA TGAGATATCC GTTAATAGAA
GGTCAAGGGA ACTTTGGTTC AATAGACGGC GACCCGCCTG CTGCAATGCG TTATACAGAA
GCAAGGTTAA CAAAATTGGC TGTTGAAATG CTTGAAGATA TAGATAAAAA CACCGTTGAT
ATGATGCCTA ACTTTGATGC TTCATTAGAA GAGCCTACGG TATTACCTTC AAAATTTCCA
AATTTAATAT GTAATGGAAC AACAGGTATT GCAGTAGGGC TTGCTACAAG CATTCCACCC
CATAACTTTA CAGAAGTGGC AGAAGCTTTA AAATACTTGG CAGAATTTCC GGATGCTACC
ATAGAAGAGC TGTTTAACTT TATAAAAGGA CCGGATTTTC CAACAGGTGG AGTAATCACA
AACACCAAAG AAGAGCTAAT TGATATATAC AAATCATCAA GAGGTTCAAT AACAATAAAA
GGTAAAGCAA GAATAGAAAA GCTGCCGGGG AACAGACAAA GGATAGTTAT CTATGAAATT
CCATACCAAG TTAACAAAGT TGAACTTATC AAAAAAATAG CGGAGCTTGT TAGAACAGGA
AAAGAAAAAG GAATATCAGA CCTAAGAGAT GAATCAGACA GAACAGGAAT TAGAATTGTA
ATAGAGTTAA AAAGAGATGC AGACGCTGAA AAAGTCTTGA AGAAACTATA CAAAAGCACG
CCTCTTGAAA AGAACTTTCC TGTAAATTTA ACAGTGTTAG TAGATAAACA GCCAAGAGTA
TTGAATTTAA AAGAATTGCT TCAAGAATTT ATAAAACACA GAATAGAAAT TATAACAAGA
AGGACGTTAT TTGAATTAGA AAAAGCAGAA AACAGACTAC ATATTGTAGA AGGGCTGATT
ACAGCCTTAG AAAATGCAGA TAAAGTTATT GAAATAGTTC GTTCATCCAA GGATACAGCA
CAAGCAAGAC AGCTGCTTAC ATCACAATTT AACCTATCTG AAACACAGGC AAACGCTATT
CTTGACATGA GATTATCAAG ATTTACATCC TTAGAAACTC AAAAATTAAA AGATGAAAGC
ATAGAGTTAA AACAAAAAAT AGAAAGATAT AAACAAATTC TTTCAAGCGA TAATGAGAAA
ATCAAAGTAT TCATCGAAGA GACTGATGAG TTAGTTAGAA AATATGGAGA CCAAAGAAAA
ACAACCATCG CAACAGAAAA AGAGCTTACA TTTAAAGAAC ATTTCATGTT TGCCATTTTA
AATACAGGAA GAATTGTTAA TTATAAAGTA GAAGATGAAA CTTCAAAAGC TGACATTTTA
CAAAGAATTA TCAATAGCCT GTCAATATCT TTAACGGAAG GAGAAAAGAT AGTCTCTATT
CAAGAAGTAG AAGGGTCTAA ACCGATTGCT TTCTTTACAA AAGATGGAAA AGCTTATTGG
AGCTTAGTTA TAGACCTTCC AAAGGGCGAA GATAAGCTAA ATATTGAAGG TGAAATCGTT
GGAACAGCTT ATCAAGGAGA GGGTGAAGAA AACAGAGTAT TTTTAATAAC AAAGAAAGGT
ATTATCAAAA GAATGTCTGA TGAAGATATA TTCTATAAGT CACAAGGACA CACGGTAATG
CCGTTAAACG AAGGTGATGA GCTTGTAGTG GCAGTTGCAG ATAGACATCC TTCCTACATT
GGAATTTACA CAAAAAATGC AGATTTACTC TTATTTGAAA GAAATGAAGT AAGAATTACA
GGAGATAAGG CAAAAGGCGT AGAAGCTATT GATTTAGATG AAAATGATGA AGTAGCCGGA
GCATTTTTCT TAAATGGTCA TGAATATCTA CTCATATCTA CTTCTTTTGG TTATATGAAG
CTTGTAGAAA AAACAGAGTT TCCAATCAAG AAAAGAGCAC AAAAAGGTCT TTTGGCAGTA
AAATTAAACA AAGACGATTA TGTAGTCTCA ATATTACCTG TTAATAAATC TGATGAAGTG
TTGATTAATA CAAAACATGG CAAACTCTTA AAGTTAAAAA TTGATAAAGA AACAATACCT
GTTGAAAAGA GAACATCCTT GGGTAAAAAT TTATTTAAAT TTGAAGCCGA TAGAATTGTG
AATGTGTTAA AACTTCCACT TTTTGAAGAA AGCAAAGAAT GA
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| Protein sequence | MEDIKKVPIE EEVKSAYIDY AMSVIAGRAI PDVRDGLKPV QRRILYSMYE LGLLPNKPYK
KSARVVGETL GKFHPHGDAS VYDALVRMAQ DFTMRYPLIE GQGNFGSIDG DPPAAMRYTE
ARLTKLAVEM LEDIDKNTVD MMPNFDASLE EPTVLPSKFP NLICNGTTGI AVGLATSIPP
HNFTEVAEAL KYLAEFPDAT IEELFNFIKG PDFPTGGVIT NTKEELIDIY KSSRGSITIK
GKARIEKLPG NRQRIVIYEI PYQVNKVELI KKIAELVRTG KEKGISDLRD ESDRTGIRIV
IELKRDADAE KVLKKLYKST PLEKNFPVNL TVLVDKQPRV LNLKELLQEF IKHRIEIITR
RTLFELEKAE NRLHIVEGLI TALENADKVI EIVRSSKDTA QARQLLTSQF NLSETQANAI
LDMRLSRFTS LETQKLKDES IELKQKIERY KQILSSDNEK IKVFIEETDE LVRKYGDQRK
TTIATEKELT FKEHFMFAIL NTGRIVNYKV EDETSKADIL QRIINSLSIS LTEGEKIVSI
QEVEGSKPIA FFTKDGKAYW SLVIDLPKGE DKLNIEGEIV GTAYQGEGEE NRVFLITKKG
IIKRMSDEDI FYKSQGHTVM PLNEGDELVV AVADRHPSYI GIYTKNADLL LFERNEVRIT
GDKAKGVEAI DLDENDEVAG AFFLNGHEYL LISTSFGYMK LVEKTEFPIK KRAQKGLLAV
KLNKDDYVVS ILPVNKSDEV LINTKHGKLL KLKIDKETIP VEKRTSLGKN LFKFEADRIV
NVLKLPLFEE SKE
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