Gene SYO3AOP1_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1156 
Symbol 
ID6331813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1204098 
End bp1204820 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content27% 
IMG OID642657438 
Productprotein of unknown function DUF72 
Protein accessionYP_001931322 
Protein GI188997071 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.692068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGATT ACATAGGATG CTCCGGATTT TTCTATTATG GATGGAAAGG AAGATTTTAT 
CCCCCTGATT TAAAGCCAAA TCAATGGTTT ACTTACTATG CTACAAAATT TAAAACTGTG
GAAATAAATT CTACTTTTTA TAACTTTCCA AAAAAGAGCT CCATAAAAAG ATTTTATAAA
ATATCTCCAG AAGATTTTAA ATTTTCTGTT AAAGTCAATA AAGCAATCAC ACATATAAAA
AGGTTTAAAG ACGTACAAAA AGACTTGAAC GAATTTTATG AAATAGTTTC TCAAAATCTT
GAAGAAAAAT TAGGAGTATT TCTATTTCAA CTGCCACCAT CATTTAAGTA TTCAGAGGAT
AATTTAGAAA GAATTTTAGG TCAAATTGAT AAAAGATATA AAAATGCTAT TGAATTTAGA
CATAAAAGTT GGTGGAATCA AGAAGTTTAT GATGCTTTTA GAAAGGAAAA TTTAATCTTT
TGTAGTATTT CTGGTCCAAA CCTTCCTGAA GAGTTAATCC AGACTTCAAC AGATTTATAC
ATAAGATTTC ATGGAAAAGT ATGGTACAAC TATCAATATT CTAAGGATGA ACTGATTAGT
TGGGCAGAAA AAATTAAAAA TTTAGAATAC GAAAATTCTT TTATTTACTT TAATAATGAT
TATAATGCTT ATGCTCCAAA AAATGCTTTA GAATTGATTG AGTTATTGAA TAAAACTAAA
TAG
 
Protein sequence
MKDYIGCSGF FYYGWKGRFY PPDLKPNQWF TYYATKFKTV EINSTFYNFP KKSSIKRFYK 
ISPEDFKFSV KVNKAITHIK RFKDVQKDLN EFYEIVSQNL EEKLGVFLFQ LPPSFKYSED
NLERILGQID KRYKNAIEFR HKSWWNQEVY DAFRKENLIF CSISGPNLPE ELIQTSTDLY
IRFHGKVWYN YQYSKDELIS WAEKIKNLEY ENSFIYFNND YNAYAPKNAL ELIELLNKTK