| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1045 |
|---|
| Symbol | |
|---|
| ID | 6332234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 1083739 |
|---|
| End bp | 1085163 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 642657333 |
|---|
| Product | Polynucleotide adenylyltransferase region |
|---|
| Protein accession | YP_001931218 |
|---|
| Protein GI | 188996967 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 82 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGGGA TAGACAAACT ATTAAATAAA ATTTTTAACA AACAAAAAGA TGAGAAGTTA
GAAGATTTAG AAATAAAAGA AAATTACATT CATGGGCTGA TATTTTACAA CTCTTATTTT
GACTATGTAG CAAAAGCTCT TCCAAAAGGT TCATTTTGTT TTCTTGTAGG TGGATGGGTG
AGGGATAGGA TCATAAACAG ACCAATCGGT GAGAATATAG ATATAGATTT TATTATCACA
GCAGACCCAC TCCAAGTTGT AAACAATTTA AAAAAATTTA TCAAAGGTGA TATCTTCCAA
TTTGAAAAAG AGAAAAAAGT AGCGACATTT TTGTTTAAAG AAAATAATTA TAACTACAGA
TTTGATTTCT CCTATCTTGA TATTTCTGAT ATACTTTCAA ATCCGGATAT AGACTTTTAT
CAAAAAGAAG AGCTAATTTT AGAAAGACTT ATAAAAGATT TATTAGAAAG AGATTTTACA
ATAAACGCAA TAGCAGTAAA TTTTGATGAT ACATCAAGCT TAAGTGCCTC AACAACTGTT
TTAATAGACC CGTCAAACGG ATTTAAAGAC CTTCAAGATG GCATCATTAG ACCAATATCT
ATTGAAAATA TCATAAAAGA CCCGGTAAGA ATTTTAAGAG GTTATAGACT TGCTTTAGAG
CTTGATTTTA CAATAGATAA AGAATTTGAG AAGTTTGTAA AAAATAATCC CAATCTAATA
GAAAAATCTC CAAAAGAAAG AATCAGAGAT GAGCTTTTAA AGATAATTTC TAATGAGAAT
TCGAAAGACA CATTAAACAA GCTTCTTGAA AACAAAATTC TGAAAAAAGT TATTTCAAAA
AATCTAAAAG ATTTAAAACT CTATGAAAGC TTGGAAGAAA ACATAAAAAA AAAACTTAAA
TTTGTAGACG TTCAAAAACT AAAAGAAATA AAACTTTATC AAAATTTCAG TAGTATCACT
TTTTTAAAAC TTGCTGCGAT TTTGTACACA CTTAAAGATT ATAAGGAAAT TTTAGAAGAA
AAGTTATTAC TTCCTGTAAA AATTTCAAAG TTTATAGAGG ATATAATCCA AGCAACAGAG
TATTTACTAT CAATCTCAAA AAATAACCCA TCTGATTTTG AGCTTAATTG GTTTTGGTAT
AAGTTTAAAA ATGCAAGTGA TTACTGCTTT TTACTTTCTT ATAGCATTAA TAAAAACTTA
GAAGATTTCA TTTTGAGATT GATAAATCAC TATGAAAACA ATTATAAAAA TAACATTGTT
GAAGAGCCGT TGTTAAGCGG TGAGGAGATA ATGAAATTAC TAAATCTCAA GCCTTCTAAG
GAAGTTGGAA TTATAAAAGA CAGTTTGATT AAAGCCCAGA TTAGTGGAAA AGTAAAGACC
AAAGCAGAAG CTACCAAGTT TGTCAAAGAG TTTAAGGGTA AGTGA
|
|---|
| Protein sequence | MFGIDKLLNK IFNKQKDEKL EDLEIKENYI HGLIFYNSYF DYVAKALPKG SFCFLVGGWV
RDRIINRPIG ENIDIDFIIT ADPLQVVNNL KKFIKGDIFQ FEKEKKVATF LFKENNYNYR
FDFSYLDISD ILSNPDIDFY QKEELILERL IKDLLERDFT INAIAVNFDD TSSLSASTTV
LIDPSNGFKD LQDGIIRPIS IENIIKDPVR ILRGYRLALE LDFTIDKEFE KFVKNNPNLI
EKSPKERIRD ELLKIISNEN SKDTLNKLLE NKILKKVISK NLKDLKLYES LEENIKKKLK
FVDVQKLKEI KLYQNFSSIT FLKLAAILYT LKDYKEILEE KLLLPVKISK FIEDIIQATE
YLLSISKNNP SDFELNWFWY KFKNASDYCF LLSYSINKNL EDFILRLINH YENNYKNNIV
EEPLLSGEEI MKLLNLKPSK EVGIIKDSLI KAQISGKVKT KAEATKFVKE FKGK
|
|---|
| |