| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1033 |
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| Symbol | |
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| ID | 6330959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1068306 |
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| End bp | 1069889 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642657321 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001931206 |
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| Protein GI | 188996955 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGA AAGTTTTAAT ATACGATACA ACGCTGCGAG ATGGGACCCA AGCTGAAGGT
GTTAGTGTTT CTGTTGAAGA TAAATTAAGA ATAGCAGAAA AACTTGCAGA TTTTGGTGTT
CATTATATAG AAGGCGGATG GCCAGGCTCT AATCCAAAAG ATATGGCATT TTTTAAAGAG
GCAAAGAAGC TAAATCTTAA AAACACAAAG CTAACAGCAT TTGGTTCTAC AAGAAGAACA
AACTTAAAGG TCGAAGATGA TCCGCAGATT CAAGACCTGA TAAAGGCAGA AACACCTGCT
ATTACAATTT TTGGAAAATC ATGGGATCTA CATGTTACTG AAGCACTTAA AACAACCTTA
GAAAAAAATC TTGAAATGAT TTACGATTCT ATTGTCTATT TAAAAAAATA CACTAACGAA
GTAATATTTG ATGCTGAACA CTTTTTTGAT GGATTTAAAG AAAATCCTGA GTATGCAATT
AAAGTTTTAA AAACAGCACA AGAAGCAGGA GCAGATTATT TAATACTTTG TGATACAAAC
GGTGGAAGCC TTCCAACAGA TATAGAAAAA GCTTTTAAAG TCGTAAAGGA TGCCGGAATC
ACTGCAAAAC TTGGAATTCA TGCTCATAAT GACTCAGACA CAGCTGTTTG GAACTCTATA
GTTGCAGTCT TAAATGGAGC TATTCAAATT CATGGAACTA TAAACGGTAT TGGTGAAAGA
TGCGGAAATG CAAACCTTTG TTCTATCATA CCAAACCTTA TGTTAAAACT TGGATATGAG
GCAATACCAA GAGAAAATCT TAGAAGATTA AAAGAAATTT CAAACTTTGT TTCTGATATT
GTAAACATGC CTGTCCCTAA GAATATGCCG TATGTAGGAG ATAGTGCGTT TGCTCACAAA
GGCGGTGTCC ATGCATCAGC TGTTCTTAAA AATCCAAGAA GTTATGAGCA TATTTTACCG
GAAGAAGTTG GAAACAGAAG AAAAGTTCTT GTTTCAGACT TGGCAGGTAA GAGCAACATT
ATTTATAAAG CAAGAGAAAT AGGTATAGAA ATAGATGAAA AAGATGAAAG ATTAGCTTCT
CTTGTTCAAG AAATAAAAGA GCTTGAGAAT CAAGGATATC ATTTTGAGGC AGCAGAAGCA
TCCTTAGAAT TACTTATAAG AAAACATCTT GGAACGCTAC CAAAGTATTT CGACCTTGAT
GCTTATAGAG TTTTAATAGC ACGCAGATAT ACAGACAAAA CACCTATATC CGAAGCTACT
GTAAGAATAA AAATAGAAAA TCATTATGAG CATACGGCAT CTCTTGGACA TGGACCGGTT
AACGCACTTG ATAATGCTTT AAAAAAAGCT TTAATATCTA AGTATCCATC TTTAGCAGAG
GTTGAGCTTA TAGACTACAA AGTTAGGATC GTGAATGAAA GTGGTGGAAC AGCAGCAAAA
ATAAGAGTGT TGATCGAAAG TAGAGATAAA ACAAAAAAAT GGGGTACTGT TGGAGTTTCG
GATAACATTA TAGAAGCATC TTGGCAGGCT GTTGTAGATA GCTTTATTTA TAAATTGGTC
AGGGATAACA TACAACCAGC ATGA
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| Protein sequence | MEKKVLIYDT TLRDGTQAEG VSVSVEDKLR IAEKLADFGV HYIEGGWPGS NPKDMAFFKE
AKKLNLKNTK LTAFGSTRRT NLKVEDDPQI QDLIKAETPA ITIFGKSWDL HVTEALKTTL
EKNLEMIYDS IVYLKKYTNE VIFDAEHFFD GFKENPEYAI KVLKTAQEAG ADYLILCDTN
GGSLPTDIEK AFKVVKDAGI TAKLGIHAHN DSDTAVWNSI VAVLNGAIQI HGTINGIGER
CGNANLCSII PNLMLKLGYE AIPRENLRRL KEISNFVSDI VNMPVPKNMP YVGDSAFAHK
GGVHASAVLK NPRSYEHILP EEVGNRRKVL VSDLAGKSNI IYKAREIGIE IDEKDERLAS
LVQEIKELEN QGYHFEAAEA SLELLIRKHL GTLPKYFDLD AYRVLIARRY TDKTPISEAT
VRIKIENHYE HTASLGHGPV NALDNALKKA LISKYPSLAE VELIDYKVRI VNESGGTAAK
IRVLIESRDK TKKWGTVGVS DNIIEASWQA VVDSFIYKLV RDNIQPA
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