| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1017 |
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| Symbol | |
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| ID | 6332585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1051465 |
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| End bp | 1055277 |
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| Gene Length | 3813 bp |
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| Protein Length | 1270 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642657305 |
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| Product | Tfp pilus assembly protein tip-associated adhesin PilY1-like protein |
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| Protein accession | YP_001931190 |
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| Protein GI | 188996939 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000312457 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAATT TTAAAAATTT TATATTATTT TTACTTTTAA TATTTTTCTA TAATAATACA
AAAGCTGCTA ATATGAGTGA TTATTGCTAT ACTCCACCAA CAATTGCTAC ATCTGTGTCT
CCAAACGTAA TGTTGAATAT TGACGTAAGC GGTTCAATGT CATGGTGTGC ATACAACCCC
GATAGCTCAA AAAGTGGATG TTGTAATTCT TCAAGCGGAT GTGGATGGAC GTATAAAGGA
ACTGAAGAGG GTTATTTTAT ACCTGACAAA GTTTATAAAT ACAACTCATC ACAAGGTTAC
TGGGAAGAAA CTACAGGAAC GCCACAAAGT TGCCCAAAAA GAAAATCTGA TATCAATACT
GCTAAATTAT ATCAAGGCAG TTGTTTAAAT TTCCTTTATA TGACACGTAT AGATTTGATT
AGATGGGCTT TAACAGGTGG AAAGCCGAAT AGTTGTAATA ATAATCAAAT TCAAAAATGC
GATCCGGAAG TATATCCAAA TACACAGTTA ACTTGCGACA GTTATGGTTG TATATTATGG
TCTGATTCTG GTGCAAAAGT AAAAGTTCCA TGGAATAGAA TAACTGGAAC TGAAGGTGGT
TTACTTTTTC AATTAAAGAC TCTTTCATTA AAGCCACGAT TTGGAGTTAT GTTTTTTTCT
GGGTCAGGAG TAAGAAATAA CAGTGTTTAT ATAGGTGATT TTGTAGGCTC GGCTAACTAT
GACGGAGTGA ATCCATACAA AAATACAATT ACAGCTATAA ATTATGAATC TCCATCAGGA
TCTACTCCTA CTGCATTGGC TCTATGGGAT ACATACAATT ATTTTGCTCA AAATGCGCCA
CAATATGGTG GATTACAACC ACAAACAGGA CAAAACGTAT GGAAAAATCC ACTTTATCAA
TGTTTTGACG AGAATAACGA TGGAAACTGT CAAGGTAATG AGCTTAAACC GGTACCTTGT
GCTAAAAACT TTGTAATTCT ATTGACAGAT GGTCAATGGA ATACTGGTAG AAATGGAATT
GCCTGCTCAA TCGATAACAA TTTTGAGAAT GCTTCAGCAG ATCCAGTTGT TCCAGCTTAC
TGGCTACATA AAAAAGGTTT TACAAATCCA GTTGATAATA GACAATCTAC TTTTTACGTT
GAGGCTTTAT ATGGAATTGG ATTATGGCTT GGTGGTACAG GAGAGAAGTC ATTAAAAAAT
GTAGCTATGT ATGGTTCTTT TGATAGATAT AAAAATTGGC CTGATAATTT ATCCGATTAT
CCTAAAGCTA CATGCGGTCC TATAGACGAT TGTTGTAATA CTTCTAATTG TGGAAAAGGT
AGTTCATGTG CAAACTTACC ACCTTCTTCT CCAGATTGGG ATAAAGATGG AGATGGAAAC
CCAGATACAT TTTTTGCTGC GTCAGATGCA AAAGAAATAA AAGATGTCAT GTATAAGGCG
ATTTTAGACA TCCTTAAACG TGCTTCTGCT GGTTCAACAG TTGCTACATT ATCAACTAAA
ACAGCAATTT CTTCTGTATT AGTTCAGCCT TTCTTCTATC CAACTTATAC AGACTCTCAA
GGAAACACAG TAAACTGGCC AGGATTTTTA AGATCATTCT GGGTTGACCC AAAAAATGAT
TTAAGAGAAG ATACAAACCA AAATAAAGTA CTAAATTTAA GCGTTGATAA AATATTCCAA
ACATTCTATG ATTTAACTAA TAACGAAACC AAAGCAGCTC TTCTTTCTGA TACAAGCACA
TGTAGTATGG ATTCTATTGT TAATATGAAA GACCTTAAAC CTGTTTTTGA TAGCGGTTGC
TGGCTTGGAA ATTGTGATCC TAACAATAGA AATATTTACT ATTCTGCTGG CACTAACATA
AAAGAATTTA AAACTACCAA TGTAAACGAT TTGAAAAATA TATGGGATTT AGTAGATGAT
AGCACATCAA ATAATTCAAT TAGCTCAACT CTTGCATCGT GTATAATTAG ATATATAAGA
GGTGAAGACG TATCAAATGA TTCAAACTGT AATTTTGATT ATGTAAAAAG AAATTTAAAA
ATTAATATTT CAGAATTCTG TCCTGGTTCT ACGGGCATAA AAACATGGAA GCTTGGAGAT
ATAATCCATT CTACACCAGC AGTAGTTGGA AATGAACCAA TAAACAATTT CCATTTAAGA
TATTCTGATA GTACATACTA TGATTATATA AATTCTGCGT CATACAAAAA CAGAGCGTCA
AGAATTATCG TTGGAGCAAA CGATGGTATG CTCCATTTCT TCAGACTTGG ATACATAAAA
GACCAGTCCT CAACAGATCC TGATAATCCA TCTGTACTCC AAAATTCACC GAACAATACA
GGAACAGATT TAATAGCTAA AGAAGAATTT GCTTTTATAC CGAAAAATGC GATTCCATAC
TTATTATGGT ATGGTCATAA AGACTATTGC CATATTCCAA CAGTTGATAG TAGAGTTTTA
ATTTTTGATG CTTCTATAAA CGGTAATCCA ACAGACGATA AGACATCAAA TTCTTGGAGA
ACTATATTAG TTGGTGTTAT GGGATTTGGT GGAAAATCAT TATCTGCCGG TACTACTACA
TATAGCTCGT CTATATTTGC ATTAGACCTT ACTGATTGGC TAAATGGCAC GGCAACAACA
CCAACATTAT TATGGGAACA AACTTTGTCT GATAATACAC TAACAATGTC CTTCCCATCG
GTCGTAAGAA GAGGAGATGC AAATAAAAAC GGAAATTGGT ATTTAGTAAT TGGTTCAGGA
CCAAAAGCTC CAAATCCATC GTCTAGCAAC GATTATACAA GCTCTCCAAA AGTATATTTC
TTTGATTTAA AGACAGGGAA TTTAGTAAAA ACTACACAAA TATCGCTACC TAATAACACT
GTTGCAGCTG TAGCTGATAC ATTCCCAATA GACGCTGACG ATGATTATAA TGATGATGCT
ATTTATTTTG GATTATATGG ATTACAAAAA CAAGGTAATA GCTGGAATAA TTGGGGTAAT
TTTTATAGAC TTGTTTTAAA TGATTCTCTT TCAAATACTC CATCTGTTGC GGTTGATCTA
TCAAGCTTTG TAAATAACGG TCAAACACCA CCAGTTACTG CTGCACCAAC TTTCTCAAAA
GATGAAAAGG GTAATTTGTG GGTATTTTTC GGAACAGGAA GATTTTTAAG CGAAGGAGAC
AAGGTTTTAA ATTATAATAA CTATTTTATA GGATTTAAAG ACCCGTGCTG GAATGGTTCT
TGTTCAACTA CCTTTGTAAA AGGTGATTTT ATTAATCAAA CAAATATAAC AGTAACAGCT
ACAGTAACAA ACACTCAGCA ACTCTGTATC TGTGATAGTA GCGGATGTAG TAATAAGACT
GTTGTAACAG GAACTACAAA TTACACTCAA CCAGTTGAAG TAGATAAAGG GTGGTATCAA
GAGTTAACAA ACGAAGCTGT TACATCTCAA GGTATAGTTT TTGGAGGAAT TGTTGATTTC
ATAACCTATG TTCCACCAAA TGATATCTGT GCTTTTGAAG GAAATTCTAA ACTATATGCT
TTGTACTATA AATCAGGAAC TGCTTATCCT GTTCCATCAA TTTTATCTCC TAAGGCTACA
AGTGGAACAA GTGGACAAGT AACTATATAC AAATCCATCG ACCTTGGAAG AGGTGCACCA
CCTGTTGGTA ATCCATTCCA AGTTAGCGTT AGCCAAAGCT CAACAAATAG ATATGAAAAA
TTCATTCAAG TTTCAACAGG TGTCGTTATT AAACAAACTC AACAACCAAC ACCTTCTGCT
CAACCGAGGT TTATACTATG GATAGAAAAA TAA
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| Protein sequence | MFNFKNFILF LLLIFFYNNT KAANMSDYCY TPPTIATSVS PNVMLNIDVS GSMSWCAYNP
DSSKSGCCNS SSGCGWTYKG TEEGYFIPDK VYKYNSSQGY WEETTGTPQS CPKRKSDINT
AKLYQGSCLN FLYMTRIDLI RWALTGGKPN SCNNNQIQKC DPEVYPNTQL TCDSYGCILW
SDSGAKVKVP WNRITGTEGG LLFQLKTLSL KPRFGVMFFS GSGVRNNSVY IGDFVGSANY
DGVNPYKNTI TAINYESPSG STPTALALWD TYNYFAQNAP QYGGLQPQTG QNVWKNPLYQ
CFDENNDGNC QGNELKPVPC AKNFVILLTD GQWNTGRNGI ACSIDNNFEN ASADPVVPAY
WLHKKGFTNP VDNRQSTFYV EALYGIGLWL GGTGEKSLKN VAMYGSFDRY KNWPDNLSDY
PKATCGPIDD CCNTSNCGKG SSCANLPPSS PDWDKDGDGN PDTFFAASDA KEIKDVMYKA
ILDILKRASA GSTVATLSTK TAISSVLVQP FFYPTYTDSQ GNTVNWPGFL RSFWVDPKND
LREDTNQNKV LNLSVDKIFQ TFYDLTNNET KAALLSDTST CSMDSIVNMK DLKPVFDSGC
WLGNCDPNNR NIYYSAGTNI KEFKTTNVND LKNIWDLVDD STSNNSISST LASCIIRYIR
GEDVSNDSNC NFDYVKRNLK INISEFCPGS TGIKTWKLGD IIHSTPAVVG NEPINNFHLR
YSDSTYYDYI NSASYKNRAS RIIVGANDGM LHFFRLGYIK DQSSTDPDNP SVLQNSPNNT
GTDLIAKEEF AFIPKNAIPY LLWYGHKDYC HIPTVDSRVL IFDASINGNP TDDKTSNSWR
TILVGVMGFG GKSLSAGTTT YSSSIFALDL TDWLNGTATT PTLLWEQTLS DNTLTMSFPS
VVRRGDANKN GNWYLVIGSG PKAPNPSSSN DYTSSPKVYF FDLKTGNLVK TTQISLPNNT
VAAVADTFPI DADDDYNDDA IYFGLYGLQK QGNSWNNWGN FYRLVLNDSL SNTPSVAVDL
SSFVNNGQTP PVTAAPTFSK DEKGNLWVFF GTGRFLSEGD KVLNYNNYFI GFKDPCWNGS
CSTTFVKGDF INQTNITVTA TVTNTQQLCI CDSSGCSNKT VVTGTTNYTQ PVEVDKGWYQ
ELTNEAVTSQ GIVFGGIVDF ITYVPPNDIC AFEGNSKLYA LYYKSGTAYP VPSILSPKAT
SGTSGQVTIY KSIDLGRGAP PVGNPFQVSV SQSSTNRYEK FIQVSTGVVI KQTQQPTPSA
QPRFILWIEK
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