Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0725 |
Symbol | |
ID | 6332200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 747648 |
End bp | 749015 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642657012 |
Product | Deoxyribodipyrimidine photo-lyase |
Protein accession | YP_001930914 |
Protein GI | 188996663 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
TIGRFAM ID | [TIGR00591] photolyase PhrII |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAATCAG AATTCAAAGG AAGAGTAAAG GCTTTAAACG ACAGACAGTT TAATCAATCG GGTAAATACA CAATATACTG GATGTCTCAC AGCCACAGGG CAAACTTTAA CCATGGTCTT GAATACGCAA TCAAACTATC AAATGACTAC AAAAAACCAT TATTAGTCTA TTTTCCAATT ACAGACAAAT ACAAATACTC AAATGCAAGA TACTACAAAT TTATGTTAGA TGGTGTTTTA GAAGCCAAAA AGTCCATAGA AGAAAGAGGT ATAAAATTTA TCATAGAGAA ATCAGATGGT ATAGAGCAGA GAGTCATAGA GATATCAAAG AATGCCGTTG CCTTAATCAC AGATAAAGCC TACTTAAAGT ATTATAGAAA GCTTTATAGT GATATAACAA AGCAATTAGA TATACCATTT TACGAAGTAG AGTCTGACGT TTGCGTTCCT GTAGAGATAG CATCCCAAAA GCAAGAAGTT TACGCTTTCA ACATAAGAAA AAAGATTTAT GATTTATTAG ATTCATATAT TCTTAAATTA GAGCCAAGGG AGCCAAAGAT TAAATCCGTT AATCTTGATT TTGGAATAAA GGAGTTAACT CTAAATAGTT CCTTAGAGAT TTTAGATATT CTCAACATAG ACAAAAGCGT TAGTTTATCA CCTTTTATAG GTGGTTATAG CCAAGCAAAA AGATGCTTGA AAGAATTTAT TGAAAAGAAG CTTCATAAAT ATAAAGAGTA TAGGTCTCAT CCGGAGCTTG ACTATCAATC AAACCTAAGT CCTTATCTTC ATTTTGGACA AATCTCGCCG ATAGAAGTTG CCCTTGAAAT CTTGTCAGAG TATAAAAAAG ATGAAAATGT TGATAGCTTT TTTAACGAGC TGATAGCTTG GAGAGAGCTT GCAAGAAACT TTTGCTACTA TAATCCAAGC TATAACCATT ATGAAGGCAT TCCTGACTGG GCTAAAAAAA CATTAGAAGA TCACAAAAAC GATAAAAGAG ATTATGTTTA TACATTAGAA GAGTTTGAAA ATGCAAAAAC CCATGATGAA TACTGGAATG CTGCACAGCT TGAACTTTTA AAATCCGGAA AGATGCATAA CTTCATGAGA ATGTATTGGT GTAAAAAAAT TATAGAATGG ACACAGGACC CAAAACATGC CTTTGATATT GCATGCTATC TAAATGATAA ATACGAGCTT GACGGAAGAG ACCCAAACGG TTATGCCGGC ATATCCTGGT GCTTTGGAAC CCATGACAGA CCATGGAAAG AAAGAAAAAT CTTTGGAAAA GTTAGATATA TGAGCGCATC GGGTTTAGAA GCAAAGTTTG ATATTAAAAA ATACGTAGAA AAAGTAAAGA GTTTATGA
|
Protein sequence | MESEFKGRVK ALNDRQFNQS GKYTIYWMSH SHRANFNHGL EYAIKLSNDY KKPLLVYFPI TDKYKYSNAR YYKFMLDGVL EAKKSIEERG IKFIIEKSDG IEQRVIEISK NAVALITDKA YLKYYRKLYS DITKQLDIPF YEVESDVCVP VEIASQKQEV YAFNIRKKIY DLLDSYILKL EPREPKIKSV NLDFGIKELT LNSSLEILDI LNIDKSVSLS PFIGGYSQAK RCLKEFIEKK LHKYKEYRSH PELDYQSNLS PYLHFGQISP IEVALEILSE YKKDENVDSF FNELIAWREL ARNFCYYNPS YNHYEGIPDW AKKTLEDHKN DKRDYVYTLE EFENAKTHDE YWNAAQLELL KSGKMHNFMR MYWCKKIIEW TQDPKHAFDI ACYLNDKYEL DGRDPNGYAG ISWCFGTHDR PWKERKIFGK VRYMSASGLE AKFDIKKYVE KVKSL
|
| |