| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0675 |
|---|
| Symbol | |
|---|
| ID | 6331458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 694585 |
|---|
| End bp | 695877 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642656960 |
|---|
| Product | MiaB-like tRNA modifying enzyme YliG |
|---|
| Protein accession | YP_001930865 |
|---|
| Protein GI | 188996614 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0621] 2-methylthioadenine synthetase |
|---|
| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00122823 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAACT TAAAGATAAA TTTTATAAGC TTAGGCTGTC CTAAGAATCT TGTAGATACA
GAAGTTTTAA TTGGAAAGTT AAACCAAGAA AATATAAGCT TTACAGCCAA TCCGGAAGAA
GCGGATGTTA TATTGATAAA TACATGTGGA TTTATTGAGC CTGCCAAAGA AGAATCTATT
GAAACAATCT TAGAAGCTGT CAAGCTAAAA CAAAATTCAA ACAAAAAAAT AATCGTTACA
GGCTGTTTGG TAGAGCGTTA TAAACAAGAG CTTGAAAAAG AAATTCCGGA AGTAGACTAC
TTCATTGACC TAAAAAATCA ATCTCAAATT CCAGTATTAT TTGACATAAA ACCCAAAGAA
AACACAAAAA GAATAATATC GACTCCAAAA CATACAGCCT ACCTAAAAAT CTCTGAAGGA
TGCGACCATA CATGTAGTTT TTGTGCCATT CCAAACATCA GAGGAAAACA TAGAAGTAAG
CCAATAGAAG CATTGGTAGA AGAAGCAAAA TATCTTGCAA ATTTAGGCGT TAAAGAGTTA
AACATTGTAT CTCAAGATAC AAGCTACTAC GGATATGATT TATACGGAAA ACCGATGCTG
TTTGAACTTT TGCAGCATCT TGAAAAAATA GATGGCATAA AATGGATAAG GCTTTACTAT
CTTTATCCAT CAACAGTAGA TGAGGATTTC TTTAAGTTCA TAAAAGGCAG TGAAAAAATT
CTTCATTATA TAGAAATGCC AATTCAACAC TCAGAAGATA AAATCTTAAA AGATATGATG
AGAGGATATA GGAAGAAAAA ACTTTATCAA ATCCTTGAAT GGAAAGAAAA ATACACGCCG
GATATGACAA TCAGAAGCTC TGTTATTGTA GGCTATCCTA CGGAGACAGA AGAGGATTTT
GAAAACATGA AAAATTTTAT ACAAGAAGCT CAGTTTGATT GGCTTGGTGT TTTTGTATAT
TCCCATGAAG AAGGAACACC TGCTTACCAA AAGCATAAAG ATAAAATCCC AAAAAAAGAA
AAAATCAGAA GATTAAACGA AATTTCGGCA CTGCAAGAAA ACATCACAGA ACAGAAAAAT
AAAAGCTTGA TAGGAAAAGA ATTAGATATA ATAATTGATG GATTTTCAGA AGAATGGGAA
ACTCTGCCAA TAGGAAGAAG TTATAGAAGT GCCTTTGAGA TAGACGGCGC TGTATATGTA
GAAACAACAG AACCTGTTAA TGTTGGAGAT ATTATAAAAG TAAGAATAAA AGATACTATC
GATAAATACG ATGTTGTTGG AGAAGCTGAG TGA
|
|---|
| Protein sequence | MKNLKINFIS LGCPKNLVDT EVLIGKLNQE NISFTANPEE ADVILINTCG FIEPAKEESI
ETILEAVKLK QNSNKKIIVT GCLVERYKQE LEKEIPEVDY FIDLKNQSQI PVLFDIKPKE
NTKRIISTPK HTAYLKISEG CDHTCSFCAI PNIRGKHRSK PIEALVEEAK YLANLGVKEL
NIVSQDTSYY GYDLYGKPML FELLQHLEKI DGIKWIRLYY LYPSTVDEDF FKFIKGSEKI
LHYIEMPIQH SEDKILKDMM RGYRKKKLYQ ILEWKEKYTP DMTIRSSVIV GYPTETEEDF
ENMKNFIQEA QFDWLGVFVY SHEEGTPAYQ KHKDKIPKKE KIRRLNEISA LQENITEQKN
KSLIGKELDI IIDGFSEEWE TLPIGRSYRS AFEIDGAVYV ETTEPVNVGD IIKVRIKDTI
DKYDVVGEAE
|
|---|
| |