| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0660 |
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| Symbol | |
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| ID | 6331151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 679471 |
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| End bp | 680247 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642656945 |
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| Product | CRISPR-associated RAMP protein, Cmr4 family |
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| Protein accession | YP_001930850 |
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| Protein GI | 188996599 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1336] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02580] CRISPR-associated RAMP protein, Cmr4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG TTTTCTATCA TGTTTTAACA CCAATGCACA TAGGCAGTGG AACAACGTTA
AGTTTAATAG ACTTACCAAT ACAAAGAGAA GCACATACAG ATTTTCCGGT GATGCCATCA
TCAGCAATCA AAGGTGTTAT AAGAGCTTCA TTTAACGAGC AAGAACAAGA AGATATCTTT
GGAAAAGGAG ATGAAGAAGG AAAAGTCATA TTTACAGATG GAAAGATTCT TTTGTTTCCG
GTAAAATCTC TAAAAGGCGT TTTTGTATGG ATAACTTCTC CTTACGTTCT CGAAAGGTTC
AAAAGAGATA CAGAAATAAA CGTCGAAATT CCAAAAGTAG AAAAAGACAA TGCGGTAGTA
TCTTCAAATA AAGTCCTGAT GAATAATAAC AAGCTTGTTT TAGAGGAATT TACATTTAAT
GCCACAATAA ACGAAAATCT AAAAAAACTC AAAGAAATCA CAAAATGCGA AATAGATGAA
GACAAAATAG CAGTAGTAAG CGATGATGTA TTTAAATTTT TTGTTAAAAA CTATACAGAA
GTAAACGCAA GAATTAAAAT CGACCAAACG AAAGGAACAG TTGATAAAGG TGGACTATGG
TACGAGGAGT TATTACCTGC AGAAACAGTG TTCTACGGGT GTATAGATGC AAGAAAAAAA
TCTGAACATG AAGAACAGCT AAATAAAGTA ATAGAAAAAA TAAACAATCA AATCCTTCAA
TTTGGAGGAG ATGAGACCTT AGGAAGAGGA TTTACAAAAA TAGTAATGGA GGCGTAA
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| Protein sequence | MKKVFYHVLT PMHIGSGTTL SLIDLPIQRE AHTDFPVMPS SAIKGVIRAS FNEQEQEDIF
GKGDEEGKVI FTDGKILLFP VKSLKGVFVW ITSPYVLERF KRDTEINVEI PKVEKDNAVV
SSNKVLMNNN KLVLEEFTFN ATINENLKKL KEITKCEIDE DKIAVVSDDV FKFFVKNYTE
VNARIKIDQT KGTVDKGGLW YEELLPAETV FYGCIDARKK SEHEEQLNKV IEKINNQILQ
FGGDETLGRG FTKIVMEA
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