| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0657 |
|---|
| Symbol | |
|---|
| ID | 6331126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 675839 |
|---|
| End bp | 676735 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 642656942 |
|---|
| Product | CRISPR-associated RAMP protein, Cmr1 family |
|---|
| Protein accession | YP_001930847 |
|---|
| Protein GI | 188996596 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1367] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
|---|
| TIGRFAM ID | [TIGR01894] CRISPR-associated RAMP protein, Cmr1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGAAG CTATTTTTAA AGTAGAAATC ATAACTCCAA CCATCATGGG CGGAGCAAAT
AGTGGAAAAT TAGACTCTAT TTTTATAAGA CCAACAGAAA TAAAATCTAC AATGAGACAG
GCTTTTAGAT TAGTTGCCGG CAAGTATGTA AGGCACGATA ATGAAAGAGT TGAAGATTTA
TACAAATTAG AAAGCGAAGT TTTTGGTAAT ACAGAAGGAA AAGGAAAGTT TAGATTGATT
GTTGATATTC CAAACAATCT AAAAACTGAA AAAATCAAAT TACTTCCACA TAAAAATGAT
TTTTCTAAAC TTGCCATATT GCCAAACCAA ACTTTTGATT TAAAAATCAT TTCTTACAAA
TATCCGGTAG AATTCTATAA AGCACTGATA AACATTGCTT TTCTGCTTGG AGTAGGACAT
AGAAGAAACA GACTATTTGG AAATATGCAG ATAGAACAAT TTAAATTACC GGATGAAGTA
GGAAAAATTG ATAAATTCTT TTTAGATGAA GGATATAAAG AAATAAAAAC AGACAACCCT
TTATTTGCTT GTTTTTCTAA AAGAGAAGAT GGCGATAATA GAAATTTTTC AGTTTTTGGT
ATGCCTCTAA AAGATGAATA TATACCAATA AATAAACAAA ATTTTGAAAA AGCTTTAGAA
AATCTCTACG AAAAAGTAAT CCATGGAATA AAAGGAGAAA AGTTAGACTT TATTCTTGGG
GGAGTAAATC CAAGAAGACA AGCATCTTTC GTAAACTTTT CTATTTTAAA AGTTGGTCAA
TCTTACAGAT TGTTTGTTAT TGGCTTTTAT TACAAGAATG AAAAATTTAA ATATAATGAT
TGGAAAAATG CAATAGAAAA AGCTAAAGAA CTAACAGAAA AACTTTTAAA AAAATAA
|
|---|
| Protein sequence | MEEAIFKVEI ITPTIMGGAN SGKLDSIFIR PTEIKSTMRQ AFRLVAGKYV RHDNERVEDL
YKLESEVFGN TEGKGKFRLI VDIPNNLKTE KIKLLPHKND FSKLAILPNQ TFDLKIISYK
YPVEFYKALI NIAFLLGVGH RRNRLFGNMQ IEQFKLPDEV GKIDKFFLDE GYKEIKTDNP
LFACFSKRED GDNRNFSVFG MPLKDEYIPI NKQNFEKALE NLYEKVIHGI KGEKLDFILG
GVNPRRQASF VNFSILKVGQ SYRLFVIGFY YKNEKFKYND WKNAIEKAKE LTEKLLKK
|
|---|
| |