| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0630 |
|---|
| Symbol | radC |
|---|
| ID | 6331684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 647288 |
|---|
| End bp | 647977 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642656916 |
|---|
| Product | DNA repair protein RadC |
|---|
| Protein accession | YP_001930821 |
|---|
| Protein GI | 188996570 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2003] DNA repair proteins |
|---|
| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAG ATAGGCTCAT CTATAAAAAA CGTATAAAAG AACTTCCAAA AGATATGCTT
CCAAGGGAGA AAGCCCTTAA AGGGGGTTTT TCTTTCCTTT CTGATGAAGA GCTTTTAGCA
ATATCTCTTG GCAGTGGAAC AAAAGGAATA AATGTTATAG GACTCGCCCA AAAAATACTC
AATGGAAAAA GCTTTAAAGA CCTAAAAGAT ATAACCTTAG ATGATTTGAA AAAAATAAAA
GGCATTGGTG AGGCAAAAGC TTTACAAATT CTTGCAATCA TAGAAATTGC AAAGAGAATG
GACGACCACG CTGAAAAAAT AAAAATCACT TCCGTATCCG ATGCTTTTAA TTATTTAAAA
TTTTTATCAA AAGAGACCCA AGAGCATATG GTAGCTTTAT ACTTAAACAG CTCTAACCAT
CTAATAGCTC AAGAAGTTAT AGCGAAAGGC TCTTTAAACG TAGTTAGAGT ACTACCAAGA
GACATTTTAT ACTATGCAAT AAAGCATAAT TGTAATGGAA TTATAATAAG CCATAACCAT
CCAAACAATG ACCCAACTCC ATCGCAAGAA GATATTGAGT TTACTAAAAA GCTTCAAACA
CTTGCCAATG AGCTTGGCTT TGATTTACTT GACCATATAA TAGTTGGTAA AAAAGATTTT
TACAGCTTTG CAAAAGCAGG CTTGATTTAA
|
|---|
| Protein sequence | MKQDRLIYKK RIKELPKDML PREKALKGGF SFLSDEELLA ISLGSGTKGI NVIGLAQKIL
NGKSFKDLKD ITLDDLKKIK GIGEAKALQI LAIIEIAKRM DDHAEKIKIT SVSDAFNYLK
FLSKETQEHM VALYLNSSNH LIAQEVIAKG SLNVVRVLPR DILYYAIKHN CNGIIISHNH
PNNDPTPSQE DIEFTKKLQT LANELGFDLL DHIIVGKKDF YSFAKAGLI
|
|---|
| |