Gene SYO3AOP1_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0557 
Symbol 
ID6332381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp573824 
End bp574468 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content32% 
IMG OID642656846 
Productprotein of unknown function DUF502 
Protein accessionYP_001930751 
Protein GI188996500 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones116 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAA ATTTAAAAAA CACATTTATT ACAGGACTTT TTGTTTTAAT ACCTATAATA 
GTTACATTTT GGGTTGTAAA GACCGTTTTA TCAGCAGTAA ATAATCTAAT ACTTCCTTAC
ATTGAAGAGC TTGGTGTTCC GGTTCCTCAT ATTCCCGGTC TTGGGATATT AGTAACTTTA
AGCATCATCT TTCTCCTTGG ACTCTTGGCT CAAAATTATT TTGGCAAGAG ATTACTGGAA
TATTGGGATA AATTTATTTC AAAAATTCCT GTAGTGAGCT CTATTTACAA TGCAACAAAG
CAAACGATGG AAACATTATT CTCAAAGAAA GAAAATTTCT CAAAGGTTGC TCTTGTTAGA
TATCCACATA AAGACACCCT TGCGATAGGC TTTGTGGCTA ATGAGTTAAA AATATGTAAT
GAACATTATT ACATTGTTTT TATACCAGCA GCAATAAACC CAACTTCTGG GTTTGCCATA
ATGGTGAAAA AAGAAGACCT TATTCTTACA GATTTAACCG TTGAAGAAGC AACAAGAACT
ATACTTTCTG GTGGATTAGT TATTAAAAAA CAAATAAAAT TATTAGAAAA TCAAAAAACA
GAAGAAGCAA AGGTTGTAGA AAACGGAGAA AAAAATGCCG TATGA
 
Protein sequence
MKVNLKNTFI TGLFVLIPII VTFWVVKTVL SAVNNLILPY IEELGVPVPH IPGLGILVTL 
SIIFLLGLLA QNYFGKRLLE YWDKFISKIP VVSSIYNATK QTMETLFSKK ENFSKVALVR
YPHKDTLAIG FVANELKICN EHYYIVFIPA AINPTSGFAI MVKKEDLILT DLTVEEATRT
ILSGGLVIKK QIKLLENQKT EEAKVVENGE KNAV