| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0416 |
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| Symbol | |
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| ID | 6331183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 431226 |
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| End bp | 432623 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642656707 |
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| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
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| Protein accession | YP_001930613 |
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| Protein GI | 188996362 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00329988 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTATTGA TCTACGGAAA AGGCAAAACA GGAGAATCAA TAAAAAAATA TCTTGAGAAA
AAAAACATTA AATCTTTGAT AATTGATGAC AACGACCCAC TGCCGGAGAA TGAAAATATA
GATACAATCA TCGTATCTCC CGGCGTACCG TTTTTTAACA GAATTTTTAA GTATGCAAAA
AAAAGGAAAA TTCCAATAAT CTCAGAAATT GAATTTGCAT ACAGACAGTG TAATGATAAC
TGTGAAATAA TAGCTATCAC CGGAACAGAT GGAAAAACAA CAACAACATC TTTGATTTAT
GAAGTTTTAA AAGAAATATC AGATGAAAAT GTTTATGTTG GCGGAAACTA TGGCATTCCA
TTTGTTGAGA TTTTGGATAA AATAGAAGAA GCTTCGTTTT CTTACCAAAA GCCTTTAGAC
CAAGAAGACA ATTCTTTGGG CAAAGCAAAT AGCGATAAAA CTATGAATAA AAATAATATT
TCAACCTCTC ACGTCTCACC TCTTATCGTA GTTTTAGAAC TCTCATCGTT TCAGATTTAC
TCAACAAATA CATTAAAGCC AAAGGTATCT ATCATACTAA ACATATCAAC AGACCATCTT
GATTGGCATA AAAAAGAAAA ACATTATATT TTGTCTAAGC TAAAACTTTT AAAAAATACA
GAATTTTCAG TATTAAATTA TAATGATAAA TGCTTAAAAA ATATAAAAGG CAAAAATGTC
TATTACTTTT CTTTAAAAGA GCTTCCGGAG GATGTTAAAG GAATTTATTT AAAAGAATAT
AGAAAAGAAG ATGGTTTAAA TGTTTATAAT CTTGTGCTTA AAGATGATAA AACAGAAGAA
ATTCAAGTAA AAACTCAGCT TATAGGATTT CATAATCTTC AAAACATAAT GGCAACGATC
CTGACGGCTT ATCTGTTGAA TGTAAATATA AATAAAGTGA TTGAAAAAAT AAAAGAATTT
AAACCTCTTA ATCATAGAAT AGAATTTGTA AAAGAAGTAG AAGGTGTTAA GTTTTATAAT
GATTCAAAAT CAACGACAGT TCAAGCTGTA GAAAAGGCGA TAGAAAGCTT TGATGAAAAA
ATTGTTTTGA TTCTTGGCGG AATAAACAAA GGTGGAGATT TTTCTAAGCT CGGTAGTTTA
TTAAAAACCA AAGTTTTATC AGCGTTTATA ATAGGAAGAG ATAAAGAGCA AATATTTCGG
ATGATTAAAG ATTATACAAA CAGCATAAAA AAGGAAAGCT TAGAGGAAGC AGTAAAAGAT
GCTTTTGAAG TTGCAAAAAG CAACAAAGCT GTTGTTTTAT TTTCTCCCGG ATGTGCAAGC
TTTGATATGT TTAAAAATTA CGCCGATAGA GGAAATAAAT TTAAAGAAAT AGTGGAAAGC
TTAAATGGTA AGAAGTAA
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| Protein sequence | MVLIYGKGKT GESIKKYLEK KNIKSLIIDD NDPLPENENI DTIIVSPGVP FFNRIFKYAK
KRKIPIISEI EFAYRQCNDN CEIIAITGTD GKTTTTSLIY EVLKEISDEN VYVGGNYGIP
FVEILDKIEE ASFSYQKPLD QEDNSLGKAN SDKTMNKNNI STSHVSPLIV VLELSSFQIY
STNTLKPKVS IILNISTDHL DWHKKEKHYI LSKLKLLKNT EFSVLNYNDK CLKNIKGKNV
YYFSLKELPE DVKGIYLKEY RKEDGLNVYN LVLKDDKTEE IQVKTQLIGF HNLQNIMATI
LTAYLLNVNI NKVIEKIKEF KPLNHRIEFV KEVEGVKFYN DSKSTTVQAV EKAIESFDEK
IVLILGGINK GGDFSKLGSL LKTKVLSAFI IGRDKEQIFR MIKDYTNSIK KESLEEAVKD
AFEVAKSNKA VVLFSPGCAS FDMFKNYADR GNKFKEIVES LNGKK
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