| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0384 |
|---|
| Symbol | |
|---|
| ID | 6332070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 400713 |
|---|
| End bp | 402014 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642656675 |
|---|
| Product | CBS domain containing protein |
|---|
| Protein accession | YP_001930581 |
|---|
| Protein GI | 188996330 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000000548164 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGTT CTGTAATATT GATAATCTTA TTTATATTTT TTGAGGCTCT TTTTTCCGGT
TCAGAGATTG CGTTATTTTC AGTAAACAAA AGCAAATTAA AGTATCAAGC TTCAAAAGGT
GATGAGAAAG CAGAAAAAAT TTATCAGCTT TTGGCTAAAC ATTACAATGA ATATATCTCT
ATTGGATTGA TTGGCACGAT TTTAAGCATA ACTTTTGCAA CATCTACATT TGTCGCATTA
CTTCATGATA TTTCCTATTA TACACCTATC ATAAAAGGAA AAGAAGAAAT CTTTGCAGAA
GCTATAGTAA TTTTGACTCT TCTGTTTGGT GAAGTTATTC CAAAGAGTAT TTTTCAGCAT
TACGCAAATG ACATTATTTA TTATGTTGTT CATTTTTTAG AAGTTTTTAG AAAAATATTT
AAGCCATTCT TAATGTTTGC AAATTTGATA AACAAAATTG TTTTCGTACT TTTTAAGCTA
AAACCTGCAT CAGAAAAACC TTTATCAAAG CAAGAAATTT TAGATTTACT GATTTCTGAA
GTTAAAGAAA TAGATGAATT AAAGAAAAAA ATAATAGCTA ATATCTTAAT TTTTAGCGAA
AGAAGAATAT CGGAGATAGT AGTACCACTT TCAGATGTTA TTGCAGTTTC TGATGATAAA
AAGGTTATGG ATATAGTCCC GATATTTAAA GAAACAGGTT ATTCAAGAAT TCCGATTTAT
AGAAAAAGAA TAGACCAAAT AATTGGATTT GTAAGGTCTT ATGATTTAAT TTTTGCAAAA
CCAAACGAGC CAATAACAAA GTACATGAAA GGTATTAGAT ACATTCCGGA GTTTGCAAAT
CTGCCAAATG TTTTAAAAGG TTTTAAAAAC TACAAAGACC ATATAGCTGT AGTCGTTGAC
GAAAGAGGAG CAACTATCGG AATAATCACT TTAAGAGATG TTTTAGAAGA AATAGTAGGA
GAAATTAAAG ATGAGTTTGT CAAAAAAGAT AAAGTAAGAC TAAAAAAACA ATCTTTAACG
GAGCTTATTG TAGATGGACT TATGGAAATT AGAGAGTTGA AAAATTATAT AGATATCAAT
ATTCCGGATG GACCATTTGA AACTATCAAC GGCATGATTA CTTACATTCT TGGAAGAATG
CCAAAGAAAG ATGAAGAGAT AGTTATAGAC CAATATGTTT TCAAAGTTTT GAAAATTGAA
AAGAGAAGAG TTTTAGAAGT TTTAATCAAA AAGTTAGAAG AGCGAGAGAC GGGACTCGAA
CCCGCGACCT ACTCCTTGGC AAGGAGTCGC TCTACCAACT GA
|
|---|
| Protein sequence | MISSVILIIL FIFFEALFSG SEIALFSVNK SKLKYQASKG DEKAEKIYQL LAKHYNEYIS
IGLIGTILSI TFATSTFVAL LHDISYYTPI IKGKEEIFAE AIVILTLLFG EVIPKSIFQH
YANDIIYYVV HFLEVFRKIF KPFLMFANLI NKIVFVLFKL KPASEKPLSK QEILDLLISE
VKEIDELKKK IIANILIFSE RRISEIVVPL SDVIAVSDDK KVMDIVPIFK ETGYSRIPIY
RKRIDQIIGF VRSYDLIFAK PNEPITKYMK GIRYIPEFAN LPNVLKGFKN YKDHIAVVVD
ERGATIGIIT LRDVLEEIVG EIKDEFVKKD KVRLKKQSLT ELIVDGLMEI RELKNYIDIN
IPDGPFETIN GMITYILGRM PKKDEEIVID QYVFKVLKIE KRRVLEVLIK KLEERETGLE
PATYSLARSR STN
|
|---|
| |