| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0285 |
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| Symbol | |
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| ID | 6332762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 291830 |
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| End bp | 292513 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642656565 |
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| Product | ribosomal protein S3 |
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| Protein accession | YP_001930484 |
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| Protein GI | 188996233 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00105887 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTCAAA AAGTACATCC AACAGGATTT AGATTAGGTA TAACACAAGA CTGGAAATCA
AAATGGTACT CTGAAAAGAA AAAGTATACT CAAACTCTCC ATGAAGATAT AAAAATAAGA
AAGTTTATTG AAGAAAGATA CAAACAAGCT GGAATCTCTT CTGTATTGAT AGAAAGGCTT
GGGGATAGAA TGAGAGTTAA AATCATGGCT GCAAGACCAG GTATCGTTAT AGGTGCTAAG
GGTGCTGAAG TTGAGAAATT AAATGAAATA ATCAAAAAAT TAACATCTAC AAAAGAAGTA
ATTGTAAACG TTGATGAAGT GAAAAAACCA GAATTAGACG CCAAATTAGT TGCTGAAGAT
ATCGCTCTTC AATTAGAAAG AAGGGTAACT CACAGAAGAG CAATGAAAAA GGCTATAGAT
TCTGCTTTAA AAGCTGGTGC AAAAGGAATT AAAACACAAG TTGGTGGAAG AATAGGCGGT
GTGGATTTAG CAAGAAAAGA GTGGTTTATG GCTGGAAGAA TGCCACTCCA AACTTTAAAA
GCAGATATTG ACTATGGAAC AGCCAGAGCT TCTACAAAAT ACGGTATCCT TGGAATTAAA
GTATGGATAT ATAAAGGCGA TAAATTAGAA GGAAAAGCGG AAGAAGTTCT TAGCAGAGTA
GAAGAAGAAC TTCACACAAC TTAA
|
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| Protein sequence | MGQKVHPTGF RLGITQDWKS KWYSEKKKYT QTLHEDIKIR KFIEERYKQA GISSVLIERL
GDRMRVKIMA ARPGIVIGAK GAEVEKLNEI IKKLTSTKEV IVNVDEVKKP ELDAKLVAED
IALQLERRVT HRRAMKKAID SALKAGAKGI KTQVGGRIGG VDLARKEWFM AGRMPLQTLK
ADIDYGTARA STKYGILGIK VWIYKGDKLE GKAEEVLSRV EEELHTT
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