Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0220 |
Symbol | |
ID | 6331408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 239345 |
End bp | 241201 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642656498 |
Product | Integrase catalytic region |
Protein accession | YP_001930419 |
Protein GI | 188996168 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.611763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAAA TTAAGAAAGG AAAAGTGATT GAGCTTGATA AAGAATACAT AATTGAGAAT TATAGCATAA ATACTGAAAA CAATACTATA GACGTAGTTT TAAGAGATAC GAACTATAAT CAATTAATTA CTATACCATT ATCTAATCTA CAAGAAAAGT TATTGGAACA ATATGAAAAA AAGAACAAGC AAGAAGACGA AAAACTAACT CCTTTCGACA AGATAGATGA AGAACTATCA AAAGAGGCAC AGAGAAGACT TGAAATAGTC AAAGCTGTTA TGAATGCTAA ATCAGTTAAG GAAAGAGAAG AAATTGCCAA AAAATGCAAT GTCCATCTAT CTACCATATA CAGATGGATG GAAAGATACA AAAAAAGTGG AGAAACTATA TATGGACTAT TGCCAAGATA CGAAAGGCGT GGCGGCAAAG GTAAAAAAAG AATAGGAGAA AAAGCTTTAG AAATAGTTGA TAAAATGATA AAAGAAAGAT ATTTAACTCA TCAAAGAATA TCTGCTAAAA GGCTTTACGA GGAAATTAAT GCTGAACTTA TAAGCCAAAA GCTAAAACCT ATTGCCTATA CCACATTACT TTACTATCTA AAAGAAATAG ACAGAGAAAC AATATACAAA AAACGTGAAG GCAGAAACAA GTATTTAAGC ACAATAAATC CTGCAAAAAA TTCATTTGAA GCAAACTATC CATTAGAATG GATACAAATA GACCATACTC CTTTAGATAT TCAAGTAGTA TCAGAAATAG ACAGAAAACC TATTGGAAGA CCTTACATAA CAGTAGCCTT AGACGTTTAC AGCAGAATGG TATATGGAAT TTATATATCA TTAGACCCTC CAAGCTATTA TTCAGTAGGA CAGGCTATAT ATATGGGACT GATAAACAAA AATCATTACT TGGAAACACT TGGAATAGAA GGAAAATGGG ATATTTATGG CTTACCTGTT AACATTCACA CAGATAATGC AGCAGAATTT GACGGAACTA ATCTTGAAAA ATTCTGCATG ACTCTGGGAA TAAACTTAGT ATATAGACCT GTAGGAAAAC CATTCTACGG CGGGCACGTT GAAAGATTTA TAAAAACTTT AAACAAAGAG CTACACAACG TAAGCGGAAC AACCTTTTCT AACACAAAAG AAAAGAGAGA ATACAATCCA GAAAAAGAAG CTGTATTTAC TTTAAAAGAA CTTGAGAAAT TTATCGTTTA TTGGATAGTT AATTACTATC ATCAAAAACC GCATGATGGA CTGCAAGGAT TAACACCTTA TGAAAAATTT AAAGAAGGAT TAACTAAATC AAACCATGGA ATAAGAATCT TAAGCCAAGA TGAATTAAGA ATAGCAAGAA TATCACTGCT GAAATCTGAT TACAGGAATG TATCAAAAGA AGGAATAAGA TTTAAAGATC TGCACTACTA CTCAGATATT CTTGTAAGAT ACGCAGGAGA TAATAAAAAA TATGAAATCA AGTATGATCC AAAAGACATA ACAAAAATAT ATTTCTACGA TGAAAATTTA CAGGATTATA TAGAAGCTTA CTGCAAAACA CCGATTCCGA TAGGAACTAC TTTGTGGGAA TTAGACAAGG CAAAAGAGAT ATTAAGAGAA AGGAGAGAAA AAATAACATC ATATAAAATT TATGAAACAA TTAAAGAACT AAGAAAGATG GAAGAAGAAG CAAGAGAAAA AACAAAACTA ATGAGAAAAC AAATAGAAAG CAATAAGACC AAATTAAGTT CCAAAGAAAT TTCAGAAAAA TTAGAAAAAC CTATCGATAA AACAGAAGAA AAACCACAAA TTAAAAAAAC AAACGAAATA AAACCCTTTG ACATAGAATT TGATTAA
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Protein sequence | MIEIKKGKVI ELDKEYIIEN YSINTENNTI DVVLRDTNYN QLITIPLSNL QEKLLEQYEK KNKQEDEKLT PFDKIDEELS KEAQRRLEIV KAVMNAKSVK EREEIAKKCN VHLSTIYRWM ERYKKSGETI YGLLPRYERR GGKGKKRIGE KALEIVDKMI KERYLTHQRI SAKRLYEEIN AELISQKLKP IAYTTLLYYL KEIDRETIYK KREGRNKYLS TINPAKNSFE ANYPLEWIQI DHTPLDIQVV SEIDRKPIGR PYITVALDVY SRMVYGIYIS LDPPSYYSVG QAIYMGLINK NHYLETLGIE GKWDIYGLPV NIHTDNAAEF DGTNLEKFCM TLGINLVYRP VGKPFYGGHV ERFIKTLNKE LHNVSGTTFS NTKEKREYNP EKEAVFTLKE LEKFIVYWIV NYYHQKPHDG LQGLTPYEKF KEGLTKSNHG IRILSQDELR IARISLLKSD YRNVSKEGIR FKDLHYYSDI LVRYAGDNKK YEIKYDPKDI TKIYFYDENL QDYIEAYCKT PIPIGTTLWE LDKAKEILRE RREKITSYKI YETIKELRKM EEEAREKTKL MRKQIESNKT KLSSKEISEK LEKPIDKTEE KPQIKKTNEI KPFDIEFD
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