| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0135 |
|---|
| Symbol | |
|---|
| ID | 6331333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 149383 |
|---|
| End bp | 150945 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642656414 |
|---|
| Product | protein of unknown function DUF87 |
|---|
| Protein accession | YP_001930335 |
|---|
| Protein GI | 188996084 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0433] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0231678 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGC TTGGAATAGT TGTAGGTTCT ACAAAACCAA ACAGAGTTAA TTTCTTATCT
AATAAACCAC TCAGACTTGG TCAGTTTGTG ATTTTAAAAT ACTTTGATGG CGATGAAGAA
ATAAGGCTTC TTGGAATGAT TAATAAAGTT GAAAGAGAAA ATAAATATAT TCCGGAAGAT
ATTCCAAATT ATGAAAAAAT TGACAGATTG ATAAAAGAAA GTTCAAGTGA GACAAAGGTT
AAAGGAGAAA TTCAAATTCT TGGAAAAATT GCAGAAAGGG ATAACGGAAT AACTCTTGAA
TTTCAAAGGA CGCCTCCTCT TCCAGCATCA GAAGTTTTAA AGCCACCAAA AGAAATATTA
GAAAAACTCT TTGGCTCAAA AGGAAAAAAT TATATAAAAA TTGGAAAGCT TTTAAGTGAA
GCAGAAGATG TAAATGTGTA TATTGATATT AATCAAATCG TTTTGAGACA TCTTGCAATC
CTTGCAATCA CAGGAGCAGG AAAGTCTAAC ACAGTATCGG TACTACTTGA CAATATAGTT
AATTTAAAAG GAACTGTTGT TGTGTTTGAT TTTCACGGAG AGTATACAAG AGCTGAATTT
AGAAGAGATG GGAAAAATGT TGTAAATGTT ATAAAACCTC TCGTTGACCC AACTACCCTT
GATAAAAAAG ATTTTGCAAA GCTAATAGGA ATTAGAGAAA ATGCAACTAC TCAGTATAGA
TACTTTAAAT ATGCAGTTGA TAAAGTATTA AGAGATTTAA AAGATGAAAA AGGCGATGAT
TGGAGAAGGT TTGTAGAGAC TGAAAGTTTT TTTGACAGAT TGATTGGTGA GCTTGAAAGT
TGGACGGATG AAGAAAAATC ATCTCCATTT AAAGGTAAAA TCAGAGAAGA ATCTCTTTAT
GAAGTTATAA ATAAAATTGA AGATACAATG GTAGATCTAA GCCATATAAT AAAAATTGGT
GCAAAAGACC TTATAGAAAA TATAAGACCG GGTATGGTAA ATGTTTTTGA CTTTTCAGAA
GTTGATGAAG AAGTAGCAGA TGCCCTTGCA TCTAACATTT TAAAACATTC TTTAATAGAA
AGAAAAAAAG CAGTAAGAGG AAGTAATAGC AAAATCCCAA ACCCAATTTT AATCGTTGTT
GAAGAAGCTC ACATTCTTGC AGGTGTTAAA TCTGACACAG ACTCTAAATA TTGGATGACA
AGAATAGCAA GAGAAGGTAG AAAGTTTGGG CTTGGCTTAT GCGTTGTTAC ACAAAGACCA
AAAGGTTTAG ATAAAGAAAT TTTATCTCAG ATGAACAATA TGATAATACT AAAACTTGTT
GAACCAGAAG ACCAAAAACA TGTTCAAAGT GCAAGTGAAT CATTATCTTC TGAGCTTATG
GAATACCTGC CATCTCTTAA CCCAGGAGAA GCTATAATTC TTGGAAATAT GACAAAAATT
CCACTGTTAA TTAAGATTGA CAAAGCTAAA GGAAAAATAC AAGGTAATGA TATACCAGTT
GTTGATAAAT GGCTCGGTTC TGAAGAAAAA GTAAGTAAAT TAGAAGATTT AAAGGACTTT
TAA
|
|---|
| Protein sequence | MEKLGIVVGS TKPNRVNFLS NKPLRLGQFV ILKYFDGDEE IRLLGMINKV ERENKYIPED
IPNYEKIDRL IKESSSETKV KGEIQILGKI AERDNGITLE FQRTPPLPAS EVLKPPKEIL
EKLFGSKGKN YIKIGKLLSE AEDVNVYIDI NQIVLRHLAI LAITGAGKSN TVSVLLDNIV
NLKGTVVVFD FHGEYTRAEF RRDGKNVVNV IKPLVDPTTL DKKDFAKLIG IRENATTQYR
YFKYAVDKVL RDLKDEKGDD WRRFVETESF FDRLIGELES WTDEEKSSPF KGKIREESLY
EVINKIEDTM VDLSHIIKIG AKDLIENIRP GMVNVFDFSE VDEEVADALA SNILKHSLIE
RKKAVRGSNS KIPNPILIVV EEAHILAGVK SDTDSKYWMT RIAREGRKFG LGLCVVTQRP
KGLDKEILSQ MNNMIILKLV EPEDQKHVQS ASESLSSELM EYLPSLNPGE AIILGNMTKI
PLLIKIDKAK GKIQGNDIPV VDKWLGSEEK VSKLEDLKDF
|
|---|
| |