Gene STER_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_1475 
Symbol 
ID4437921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand
Start bp1378765 
End bp1379109 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content30% 
IMG OID639677079 
ProductCRISPR-associated Cas2 family protein 
Protein accessionYP_820830 
Protein GI116628211 
COG category[S] Function unknown 
COG ID[COG3512] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01573] CRISPR-associated endoribonuclease Cas2 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATA GATATATGCG AATGATATTA ATGTTTGATA TGCCAACAGA TACTGCTGAA 
GAGAGGAAAG CGTATCGTAA GTTTAGAAAG TTTCTTTTAA GTGAAGGTTT TATCATGCAC
CAGTTTTCGG TTTATAGTAA ACTTTTGTTA AATAATACTG CAAATAAAGC AATGATTGGA
CGACTTAAGG CTAATAATCC TAAAAAAGGA AATATAACAA TACTAACAGT TACTGAAAAG
CAATTTGCCC GTATGATTTA TTTGTACGGA GATAAAAACA CAAGTATTGC CAACTCAGAC
GAAAGATTAG TATTTTTAGG AGAAAACTAT TGTGATGAAC ATTAA
 
Protein sequence
MSYRYMRMIL MFDMPTDTAE ERKAYRKFRK FLLSEGFIMH QFSVYSKLLL NNTANKAMIG 
RLKANNPKKG NITILTVTEK QFARMIYLYG DKNTSIANSD ERLVFLGENY CDEH