| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_1315 |
|---|
| Symbol | |
|---|
| ID | 4437102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 1221872 |
|---|
| End bp | 1223200 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639676935 |
|---|
| Product | branched-chain amino acid permease |
|---|
| Protein accession | YP_820688 |
|---|
| Protein GI | 116628069 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1114] Branched-chain amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0201868 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAA AAGGAGGCCT TACAGCCCTT TTACTGTTTG GTATGTTCTT CGGAGCGGGA
AACCTAACTT TCCCACCTCA GCTAGGCTTT GAATCTGGAG GTCATTTCTG GCCAGCTATT
GCCGGTTTTG TTCTATCTGG TGTCGGAATT GCAATTCTAA CACTTATTAT TGGGACTCTA
AATCCGAAGG GATATATTCA TGAGATTTCT CAAAAAATCT CACCTAAGTT TGCCTTGCTA
TACTTGTCGG TGCTTTACTT GTCTATTGGA CCATTCTTTG CCATCCCAAG GACAGCAGCA
ACAGCTTTTT CAATTGGTAT TGAACCAATA CTTGGTAATA GTCATACTAG TCTATGGTTA
CTTGCCTTCA CAGCCGTTTA TTTTGCCTTG GCTTTATGGA TTGCAATGAA TCCTTCTAAG
ATTTTAGATA GTATTGGTCG AATCCTGACT CCTATTTTTG CCCTATTAAT CGTTATTTTG
ATTGTAGTTG GTGCCTTTAA ATATGGTGGT CATAGCACAC ATACTGCAAC GGAAGCTTAT
AAAGCCTCAG CTTTTGGTAA TGGTTTCTTG GAAGGGTACA ATACTTTAGA TGCCTTGGCT
TCGGTAGCCT TTAGTGTGGT GGCAGTAGTA ACCCTCAATC AATTAGGCTT TAAATCTAAA
AAAGAGTACA TCTCAACCAT TTGGATTGTA GGTATTCTGG TTGGATTGAT GTTCTCAGGT
TTATACTTAG GTCTAGCATT CTTGGGTAAC CATTTCCCAC TTGATACATC AACTTTGGGA
GAAGGTGCTA ACCTTGGAGC AGCAGTTCTA TCGAGTGCAA CACAGGCTAT CTTTGGTCCG
ATTTCACAGA TTTTCCTAGC AGTTATGGTA ACAGTGACGT GCTTTACGAC AACAGCAGGC
TTGATTGTGG CGACCGGTGA GTTCTTTAAT AAGGCCTTCC CACAAGTCTC ATACAAAACC
TATGCTATTG TCTTTACTCT TATTGGATTT GCGATTGCCA ACTTGGGACT TAATAATATC
ATTGCTTTCT CAGTACCAGT ACTTTTGATT CTTTACCCAA TTACAATTAC AATTGTTATG
ATTGTAATTG CTAATAAGTT TGTAGCCTTG TCTAAACCTG GTATGCAAAT TACAGTTACT
GTAGTGACAC TTATCGCTTT GCTTAGTGTA ATTGGCAGTC AGTTCAAACT TGCAGGACTT
AATGCCATCA TTAACTTCCT TCCATTATCG GGAGCATCAC TGCCATGGTT GATTCCAGCC
ATCTTGTGTA TCCTCTTGTC TCTCGTTTTA CCAGATAAAA TCAAGAGTGA AAGCTTTGAA
ATGGAATAA
|
|---|
| Protein sequence | MLKKGGLTAL LLFGMFFGAG NLTFPPQLGF ESGGHFWPAI AGFVLSGVGI AILTLIIGTL
NPKGYIHEIS QKISPKFALL YLSVLYLSIG PFFAIPRTAA TAFSIGIEPI LGNSHTSLWL
LAFTAVYFAL ALWIAMNPSK ILDSIGRILT PIFALLIVIL IVVGAFKYGG HSTHTATEAY
KASAFGNGFL EGYNTLDALA SVAFSVVAVV TLNQLGFKSK KEYISTIWIV GILVGLMFSG
LYLGLAFLGN HFPLDTSTLG EGANLGAAVL SSATQAIFGP ISQIFLAVMV TVTCFTTTAG
LIVATGEFFN KAFPQVSYKT YAIVFTLIGF AIANLGLNNI IAFSVPVLLI LYPITITIVM
IVIANKFVAL SKPGMQITVT VVTLIALLSV IGSQFKLAGL NAIINFLPLS GASLPWLIPA
ILCILLSLVL PDKIKSESFE ME
|
|---|
| |