Gene STER_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0970 
Symbol 
ID4438241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand+ 
Start bp895636 
End bp896640 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content37% 
IMG OID639676629 
Producthypothetical protein 
Protein accessionYP_820383 
Protein GI116627764 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00123478 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATT TATATAGTCA AAGGTCCAAT TATTACCTGT CCTTATCTGA ACAAAGAATT 
ATCATTAAAA ATGATAATAA AGAGATTGTC AAAGAAGTGT CCATTTCACT CGTTGATAAT 
GTATTACTTT TTGGTAATGC ACAACTGACC ACCCAACTCA TCAAAGCCTT ATCAAAGAAC 
AAGGTGAATG TTTACTATTT CTCAAATGTT GGTCAATTTA TTTCTAGTAT TGAAACCCAC 
AGGCAGGACG AATTCCAAAA GCAAGAGTTG CAAGCAAAGG CTTATTTTGA AGAGGATTTT 
CGTTTAGAGG TTGCGAGGAG TATTGCTACG ACCAAGGTGA GGCACCAAAT TGCCTTACTT 
AGAGAGTTTG ATACGGATGG TCTACTAGAT ACCTCAGATT ATTCTAGGTT TGAAGATAGT 
GTCAATGATA TTCAGAAAGC TTATTCCATT ACAGAAATTA TGGGTTACGA AGGTCGCCTT 
GCGAAATCCT ATTTTTACTA TCTGAATTTA CTCGTTCCTG ATGACTTTCA TTTTAATGGT 
AGGAGTAGAC GGACTGCGGA GGATTGTTTT AACAGTGCCC TCAATTTTGG CTATAGTATC 
TTATATTCTT GCTTAATGGG GCTGATTAAG AAAAACGGGC TAAGCTTGGG ATTTGGGGTA 
ATTCACAAGC ATCATCAGCA TCATGCGACC TTGGCCAGTG ATTTAATGGA AGAATGGAGA 
CCTATCATCG TTGATAATAC GCTTATGGAG TTGATACGAA ATGGTAAACT TCTTTTAAGT 
CATTTTGAAA ATAAGGATCA AGACTTCATA CTCACCGATG AAGGCAGAGA AATCTTTGCA 
TGGGCTTTAC GTTCAAGAAT ATTAGAAGTC CATCGGTATA TTGAGTTAGA CAAAAAACGC 
TATTCTTTTC TTTATACAGC AGATAGGCAA ATCAAGAGTT TGATTAGGGC TTTTAGAGAA 
CTTGACCCTA GTCTCTATGA GACAAGTTAC ACAGGAGGGC ATTAA
 
Protein sequence
MSDLYSQRSN YYLSLSEQRI IIKNDNKEIV KEVSISLVDN VLLFGNAQLT TQLIKALSKN 
KVNVYYFSNV GQFISSIETH RQDEFQKQEL QAKAYFEEDF RLEVARSIAT TKVRHQIALL 
REFDTDGLLD TSDYSRFEDS VNDIQKAYSI TEIMGYEGRL AKSYFYYLNL LVPDDFHFNG 
RSRRTAEDCF NSALNFGYSI LYSCLMGLIK KNGLSLGFGV IHKHHQHHAT LASDLMEEWR 
PIIVDNTLME LIRNGKLLLS HFENKDQDFI LTDEGREIFA WALRSRILEV HRYIELDKKR 
YSFLYTADRQ IKSLIRAFRE LDPSLYETSY TGGH