Gene STER_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSTER_0962 
Symbol 
ID4438271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptococcus thermophilus LMD-9 
KingdomBacteria 
Replicon accessionNC_008532 
Strand+ 
Start bp890467 
End bp890952 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content41% 
IMG OID639676621 
ProductNUDIX family hydrolase 
Protein accessionYP_820375 
Protein GI116627756 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.154393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCA AAAATCACTT TGGTGTATAC GGAGTCTGCC TTCAAGAAGG GAAATTGCTA 
TGCATTGAGA AAACGAGAGG ACCTTATCAG AATCGTTTTG ATTTACCGGG TGGTGGTCAA 
GAACTAGGTG AGGGACTGAC AGAAACCCTC GAAAGAGAGG TTCTGGAAGA GACGGGCTAT 
ACGCTTAGCC GTTATTCAAA TCCTAGGATT TATAATGTAA TGGTTCAAGA AGGTGGGCAA 
GACTTCGCAG TACATCACAT CATGGCCTTT TATGATATCG TACTCGATTT TGAGCGCTCT 
CAAAAATCCC TTCCTCAAGA GGTTCTTGAT GGAAGCAATG ATTCAGCAAA TGCAATTTGG 
ATTCCTTTCG AGCAGATTAC CGAAAAAAAT GCCTCACCCT TAGTGTTGAA GGTGAAGGCA 
GAGTTAGTTG GATTTCCAGA ATTAGAACTG ACAAGCTATA TAAATTGGAA GACAAAAGAA 
GGATAA
 
Protein sequence
MEIKNHFGVY GVCLQEGKLL CIEKTRGPYQ NRFDLPGGGQ ELGEGLTETL EREVLEETGY 
TLSRYSNPRI YNVMVQEGGQ DFAVHHIMAF YDIVLDFERS QKSLPQEVLD GSNDSANAIW 
IPFEQITEKN ASPLVLKVKA ELVGFPELEL TSYINWKTKE G