| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0729 |
|---|
| Symbol | |
|---|
| ID | 4438175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | - |
|---|
| Start bp | 662573 |
|---|
| End bp | 663907 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639676427 |
|---|
| Product | manganese transporter NRAMP |
|---|
| Protein accession | YP_820181 |
|---|
| Protein GI | 116627562 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
|---|
| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTTT CAAAAAAGGT TTCCCTTTCT GAGGTAAACC AATCCGTAGA TACACCTAAT
AATAATCGTT TTTGGCAAAA TCTTAAGGCT TTCTTGGGAC CTGGGGCTCT TGTGGCCGTG
GGTTACATGG ATCCAGGGAA CTGGATAACA AGTGTCGTCG GTGGGGCGAC CTACAAGTAC
AGCCTACTCT TTGTCATCTT AATTTCATCA TTAATCGCTA TGCAGTTGCA ACAAATGGCC
GGAAAATTAG GGGTTGTGAC CCAAATGGAC CTAGCTCAAG CGACTGCCTA CCACTCACCT
AAATGGTTGC GATACACGCT TTGGGTGATT CTTGAGCTGG CCTTAATGGC GACGGACTTG
GCTGAGGTAC TTGGTTCTGG CATCGCTCTT AACCTACTCT TTGGTATTCC AATCATGGTT
GCTATTCTGG TGACAGTCCT TGACGTCTTC CTACTCCTGC TCATCATGAA GCTGGGATTC
AGGAAAATCG AGGCTATTGT TTCAACCTTA ATTTTGACCA TCTTGGTTAT CTTTGCCTAT
CTAGTAGCCT TGTCTGAGCC TAGTGTTGCG GGAATCCTCG AGGGTTATCT TCCTACGCCA
GCACTCTTCG AGCCACATGC TGCTGGGGAC ACCAACCAAT TGACTTTGGC ACTTGGGATT
GTGGGGGCAA CCGTTATGCC ACATAACCTC TACTTGCACT CATCCTTGTC ACAGACTCGT
AAGGTTGACT ATTCAGATGA TAAAGACGTG ACCAAGGCTG TCCGTTTCAT GACCTGGGAC
TCCAACATTC AATTGTCTTT GGCCTTTGTG GTTAACTCCC TCCTCTTGAT TTTGGGGGCA
GCTCTCTTCT TTGGTCACGC TTCTGATATT TCAGCCTTCT CACAAATGTA CAATGCCCTT
CAGGACTCTA AGATTGCTGG TGCGTTAGCT AGTTCGACAC TTTCAACTCT CTTTGCCTTG
GCGCTCTTGG CTAGTGGTCA AAACTCTACT ATCACTGGTA CTTTGAGTGG TCAAATTGTC
ATGGAAGGTT TCCTCCACAT GAGGTTACCA AAGTGGGTAA TTCGTTTGTT CACACGTCTC
TTCGCCCTGC TACCTGTTAT CATTGTAGCT ATTCTCTACG GCGATCAAGA AAAGACACTG
GATCAACTCT TGGTGTATTC ACAAGTATTC CTTTCAATTG CCTTGCCATT CTCTATTTTC
CCTTTGATTT ACTACACTTC TAAAAAATCA CTCATGGGAA AACACGTCAA TGCCAAGTGG
AATACCTACC TCGGTTATGC CATCGCTATT GTCCTAACCA TTCTCAATCT CAAACTTATC
TTTGATACGT TTTAA
|
|---|
| Protein sequence | MTFSKKVSLS EVNQSVDTPN NNRFWQNLKA FLGPGALVAV GYMDPGNWIT SVVGGATYKY
SLLFVILISS LIAMQLQQMA GKLGVVTQMD LAQATAYHSP KWLRYTLWVI LELALMATDL
AEVLGSGIAL NLLFGIPIMV AILVTVLDVF LLLLIMKLGF RKIEAIVSTL ILTILVIFAY
LVALSEPSVA GILEGYLPTP ALFEPHAAGD TNQLTLALGI VGATVMPHNL YLHSSLSQTR
KVDYSDDKDV TKAVRFMTWD SNIQLSLAFV VNSLLLILGA ALFFGHASDI SAFSQMYNAL
QDSKIAGALA SSTLSTLFAL ALLASGQNST ITGTLSGQIV MEGFLHMRLP KWVIRLFTRL
FALLPVIIVA ILYGDQEKTL DQLLVYSQVF LSIALPFSIF PLIYYTSKKS LMGKHVNAKW
NTYLGYAIAI VLTILNLKLI FDTF
|
|---|
| |