Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | STER_0533 |
Symbol | |
ID | 4436793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptococcus thermophilus LMD-9 |
Kingdom | Bacteria |
Replicon accession | NC_008532 |
Strand | + |
Start bp | 479163 |
End bp | 479819 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639676250 |
Product | peptidoglycan hydrolase |
Protein accession | YP_820007 |
Protein GI | 116627388 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1705] Muramidase (flagellum-specific) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.679599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGAAAG GAAAAAAGAA AACTAAGTCG AAAGCTAGAC CTAAGAAATC TAAAAAGAAA AAGAAGTCTG TCTTGCTTTT TCCTAAATTT TTCCAAAAGT GGAGTCTGAT TTTTATTGGC CTATTTTCTT TATTGGGCCT CTTAGCTAGT TTAAATTTTC CAAGATTGAC TATGGAAAAA AATATGACGC CTACGGATGA GACGACGGTT GCTTTTATTG CTGAGATTGG TGAGACGTCG CGCTATTTGG CAGCTAGAAA TGATCTTTAT GCATCTGTCA TGATAGCTCA GGCTATTCTA GAATCTGACT CTGGACAATC ACAATTAAGT CAAAAGCCAC TTTACAATTT CTTTGGAATT AAAGGAGAAT ACAATGGTCA AAGTGTAACC TTACCGACCT GGGAGGATGA TGGTAAGGGA AATCCCTACC ATATCGATGC TGCCTTTCGT TCCTATGGTT CTGTGGAAAA TTCTCTACAG GACTATGTGG AGTTTCTTGA GGGTAGCTAC TATGTCGGAG TACACCGCTC CAAAACGAGA AGTTACAAAG ATGCGACTGC AGCCCTAACA GGTGTTTATG CCACCGACAC GACCTATGGT GATAAGTTGA ACAGCATCAT TGAACAATAT CAGTTAACTA TTTATGACAC ATATTAG
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Protein sequence | MPKGKKKTKS KARPKKSKKK KKSVLLFPKF FQKWSLIFIG LFSLLGLLAS LNFPRLTMEK NMTPTDETTV AFIAEIGETS RYLAARNDLY ASVMIAQAIL ESDSGQSQLS QKPLYNFFGI KGEYNGQSVT LPTWEDDGKG NPYHIDAAFR SYGSVENSLQ DYVEFLEGSY YVGVHRSKTR SYKDATAALT GVYATDTTYG DKLNSIIEQY QLTIYDTY
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