| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0426 |
|---|
| Symbol | |
|---|
| ID | 4437357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 372149 |
|---|
| End bp | 372787 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639676153 |
|---|
| Product | HAD family sugar phosphatase |
|---|
| Protein accession | YP_819910 |
|---|
| Protein GI | 116627291 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0044369 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTAGAGG CAATTATTTT TGATATGGAT GGTGTCCTTT TTGACACTGA AAAATATTAT
TATGATCGAC GGGCAAGTTT TTTAGGCCAA AAGGGTATTT CAATAGATCA TTTACCCCCG
TCTTTCTTTA TAGGTGGAAA TACTAAGCAG GTTTGGGAAA ATATTCTTAG AGATGATTAT
GATAAGTGGG ATGTGTCAAC TTTACAAGAA GAGTACAATA CTTATAAACA AAATAATCCC
TTACCCTATA AAGAATTAAT TTTTCCTGAT GTTTTAAAGG TTTTAAATGA AGTGAAATCT
CAAGGGTTGA AAATAGGCTT AGCCTCTAGC TCAGTGAAAG CAGATATCTT TAGAGCTTTG
GAGGAAAATC GTTTGCAAGG TTTCTTTGAT ATTGTTCTCT CAGGAGAGGA ATTCAAAGAG
AGTAAACCCA ATCCAGAGAT TTATTTGACA GCGTTAAAGC AATTAAACGT GCAAGCAAGT
CGTGCTCTTA TCATTGAAGA TAGTGAAAAA GGAATTGCTG CTGGAGTAGC TGCAGATGTA
GAGGTCTGGG CGATTAGAGA TAATCAGTTT GGTATGGATC AAAGTGCTGC AAAAGGTTTA
TTGGATAGTC TTACAGATGT TTTAGACTTA ATAAAATAG
|
|---|
| Protein sequence | MVEAIIFDMD GVLFDTEKYY YDRRASFLGQ KGISIDHLPP SFFIGGNTKQ VWENILRDDY
DKWDVSTLQE EYNTYKQNNP LPYKELIFPD VLKVLNEVKS QGLKIGLASS SVKADIFRAL
EENRLQGFFD IVLSGEEFKE SKPNPEIYLT ALKQLNVQAS RALIIEDSEK GIAAGVAADV
EVWAIRDNQF GMDQSAAKGL LDSLTDVLDL IK
|
|---|
| |