| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0383 |
|---|
| Symbol | infB |
|---|
| ID | 4437940 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 334363 |
|---|
| End bp | 337194 |
|---|
| Gene Length | 2832 bp |
|---|
| Protein Length | 943 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639676113 |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_819880 |
|---|
| Protein GI | 116627261 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCAAAGA AACGATTATA TGAAATCGCA AAAGAGGTTG GTGTAGAAAG CAAGGTTATT
GTTGCGAAAG CTCAGGAACT AGGCCTTTCT GTTAAGAGCC ACTCCTCATC AGTTGAAGAA
GCAGATGCTA ATCGTATCAC TTCAAGTTTA AAAGCGGGTA CAGCCAAGGA TGAAAGTAAG
CCAGCACCTA AAGCGACACC AACCCCTAAA GAGGAGAAGG TAGAGCCTAA GGTTGATAAG
GCATCTGTTG CAAAATCAGC TCCTGCTAAA GAAACATCAA AGGCTGAAGT CAAAGAAGCC
TCTGTGGCTC TGAAAAAACC GAAAAGCCGT AATTTTAAGG CCGAACGAGA AGCACGTGCC
AAGGCAGAAG CAGAACGTCG TAAAAACGGT GGGGGACGAG ATAACCGTAA CCGAAATCAA
CAAGGAAACG ATCAAGGTAA GCGTCACAAT AATGATCGTC GCAATCAAAA AGGAAATGGT
CAAGGGGACC ATAACAAAGG AAATCGCGAT AACAGTACTA ATCATGACCG TAATTTCCAA
GGGAAACTGC GTAATGATCA GAATCAAAAT AACCGTAGAG ATAATGCTCG AAATAATCAG
GCAGGTCCGC GCATTGACTT AAAAGCGCGT GCAGCAGCCT TGAAGGCAGA GCAAAACGCA
GAGTATTCAC GTCAAAGTGA AACACGTTTC CGTGAAGAAA AAGCTGCAGA GCAACGCCGT
GCAAAAGAAC AGGAAAAGGC AAGAAAAGAA AAACAACAAG CTGAAGTAGC AGTTCAAAAG
GCCGCTGCTG AAACTAAGCC AGCTCCAAAA CCAGCACCAG TGGCTCCCCA ATCAGCTCCA
ACTGCACAAG TACAAGATAC ACGTCGTAAA AAAGTACGTC CAAATAAATC ACGTGATAAT
CATCGCGTGA ATGAAGATGG ACCAAAGCAA ACTAGAAATA ATAAGTGGAA TAATCAAAAC
CAAGTGAGAA ATCAACGAAA TAGTAATTGG AATAAAAACA AAAATAAAAA AGGTAAAAAT
AACCGTGGTA ATTCAGCTCC GAAACTAGTA ACAGAGCGTA AATTCCATGA ATTACCAAAA
GAATTTGAAT ACACAGAAGG TATGACGGTT GCAGAAATCG CAAAACGTAT TAAACGTGAG
CCAGCTGAAA TCGTTAAGAA ACTCTTCATG ATGGGTGTTA TGGCAACTCA AAACCAATCT
CTTGATGGCG ATACAATTGA GTTGTTGATG GTTGACTATG GTATTGAGGC AACCAAAAAA
GAAGAGGTCG ATAATGCTGA TATCGAACGT TTCTTTGTTG ATGAAGATTA CCTCAATAAA
GATGCTATGG TAGAGCGCGC ACCAGTTGTT ACTATCATGG GACACGTTGA CCACGGTAAA
ACAACCCTTC TTGATACTCT TCGTAATTCT CGTGTTGCTA CAGGTGAAGC AGGTGGTATC
ACACAGCACA TTGGTGCCTA CCAAATTGAA GAGGGTGGTA AGAAGATTAC CTTCCTTGAT
ACCCCTGGAC ACGCGGCCTT TACATCTATG CGTGCTCGCG GTGCCTCTGT TACAGATATT
ACTGTCTTGA TTGTAGCTGC GGATGATGGT GTTATGCCAC AAACGATTGA AGCCATCAAC
CACTCTAAAG CTGCGGGTGT TCCAATCATT GTTGCGATTA ACAAGATTGA TAAACCAGAT
GCGAACCCAG AACGTGTTAT CGGTGAATTA GCAGAGCATG GCGTTATCTC AACAGCTTGG
GGTGGTGATA GCGAATTCGT TGAGATTTCA GCGAAATTTG GTCAAAACAT TGAAGAATTA
CTTGAAACTA TTCTTCTTGT CGCAGAAGTT GAAGAACTTA AGGCTGATCC AACAGTTCGA
GCCATCGGCA CTGTTATCGA AGCTCGCTTG GATAAAGGTA AAGGTGCGGT TGCTACCCTT
CTTGTACAAC AAGGTACTTT GAATGTTCAA GATCCAATCG TTGTTGGTAA CACTTTCGGA
CGTGTTCGTG CTATGACCAA TGACCTTGGT CGTCGCATTA AGACTGCAGG ACCATCAGCA
CCAGTTTCAA TTACTGGTTT GAATGAAGCA CCAATGGCTG GTGACCATTT TGCGGTTTAT
GAAGATGAAA AGGCAGCTCG TGCTGCTGGC GAAGAGCGTG CAAAACGTGC TCTTATGAAA
CAACGTCAAC AAACACACCG TGTTAGTCTT GATAACCTCT TTGATACCCT TAAAGCTGGT
GAAATGAAAA CTGTTAATGT TATTATCAAG GCTGACGTAC AAGGTTCAGT TGAAGCCTTG
GCAGCATCTC TTCTTAAGAT TGATGTTGAG GGGGTTCGTG TAAATGTTGT TCACTCAGCA
GTAGGTGCTA TTAACGAATC TGATATTACG CTTGCCGAAG CCTCAGATGC TGTTGTTATC
GGATTTAACG TTCGTCCTAC ACCACAGGCG CGTCAACAAG CGGAAACTGA TGAAGTTGAA
ATTCGCCTTC ATAGCATCAT CTATAAGGTT ATCGAAGAAA TCGAAGATGC CATGAAAGGG
ATGCTTGATC CTGAATTTGA AGAAAAAATC ATTGGTGAAG CAGTTATCCG TGAAACCTTC
AAAGTTTCTA AAGTCGGAAC AATCGGTGGA TTCATGGTTA CTAATGGTAA AATCACTCGT
GATTCAAGTG CCCGTGTCAT TCGTGATGGT GTCGTTATTT TTGATGGTAA ATTGGCAAGC
TTGAAACACT ATAAAGATGA CGTTAAAGAA GTCGGAAACG CTCAAGAGGG TGGTTTGACG
ATTGAAAACT ATAACGATAT TAAAGTTGAT GACGTTATCG AAGCTTACAT CATGGAAGAA
ATCAAACGGT AA
|
|---|
| Protein sequence | MSKKRLYEIA KEVGVESKVI VAKAQELGLS VKSHSSSVEE ADANRITSSL KAGTAKDESK
PAPKATPTPK EEKVEPKVDK ASVAKSAPAK ETSKAEVKEA SVALKKPKSR NFKAEREARA
KAEAERRKNG GGRDNRNRNQ QGNDQGKRHN NDRRNQKGNG QGDHNKGNRD NSTNHDRNFQ
GKLRNDQNQN NRRDNARNNQ AGPRIDLKAR AAALKAEQNA EYSRQSETRF REEKAAEQRR
AKEQEKARKE KQQAEVAVQK AAAETKPAPK PAPVAPQSAP TAQVQDTRRK KVRPNKSRDN
HRVNEDGPKQ TRNNKWNNQN QVRNQRNSNW NKNKNKKGKN NRGNSAPKLV TERKFHELPK
EFEYTEGMTV AEIAKRIKRE PAEIVKKLFM MGVMATQNQS LDGDTIELLM VDYGIEATKK
EEVDNADIER FFVDEDYLNK DAMVERAPVV TIMGHVDHGK TTLLDTLRNS RVATGEAGGI
TQHIGAYQIE EGGKKITFLD TPGHAAFTSM RARGASVTDI TVLIVAADDG VMPQTIEAIN
HSKAAGVPII VAINKIDKPD ANPERVIGEL AEHGVISTAW GGDSEFVEIS AKFGQNIEEL
LETILLVAEV EELKADPTVR AIGTVIEARL DKGKGAVATL LVQQGTLNVQ DPIVVGNTFG
RVRAMTNDLG RRIKTAGPSA PVSITGLNEA PMAGDHFAVY EDEKAARAAG EERAKRALMK
QRQQTHRVSL DNLFDTLKAG EMKTVNVIIK ADVQGSVEAL AASLLKIDVE GVRVNVVHSA
VGAINESDIT LAEASDAVVI GFNVRPTPQA RQQAETDEVE IRLHSIIYKV IEEIEDAMKG
MLDPEFEEKI IGEAVIRETF KVSKVGTIGG FMVTNGKITR DSSARVIRDG VVIFDGKLAS
LKHYKDDVKE VGNAQEGGLT IENYNDIKVD DVIEAYIMEE IKR
|
|---|
| |