| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0346 |
|---|
| Symbol | |
|---|
| ID | 4438206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 300663 |
|---|
| End bp | 301208 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639676078 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_819845 |
|---|
| Protein GI | 116627226 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4720] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA ATTCAATTCG TACAGTAGTT GCGACAGGTA TCGGTGCAGC ACTCTTTATT
ATCATTGGTA TGTTTGTTAA TATTCCTATT TTTGGGAATA CCAGCATCCA ACTTCAGTAT
GCTGTTCAAG CTCTATTCTC AGTGATTTTT GGGCCTATTA CAGGTTTCTT TATGGGCTTC
ATTGGACATG CGCTTAAAGA TGGTATTCAA TACGGAAATA TCTCATGGGC TTGGGTTCTT
GCAAGTGGTA TTACAGGTCT TGTTATTGGC CTATTTGGTA AAAAATATGA TGTAACAATG
GGTAAATTCT CTGTAATGAG TATGATTTGG TTCAACCTAG CACAAGCATT AGGACTGCTT
ATTGGTTATG GTGTAGTTAC GCCAATCGGT GATAAAATCC AATTTGCTCA AGCCTGGTCA
TATCTTTATG CACAAAGTTT TGTAGCTGGC GTAGCTAACT TTATTACAAT TGCAATTGGG
GGAACACTCC TTCTTGCCAT CTATGCTAGT TCACGTACAC AATCTGGTAG TCTTACCAAA
GACTAG
|
|---|
| Protein sequence | MKNNSIRTVV ATGIGAALFI IIGMFVNIPI FGNTSIQLQY AVQALFSVIF GPITGFFMGF
IGHALKDGIQ YGNISWAWVL ASGITGLVIG LFGKKYDVTM GKFSVMSMIW FNLAQALGLL
IGYGVVTPIG DKIQFAQAWS YLYAQSFVAG VANFITIAIG GTLLLAIYAS SRTQSGSLTK
D
|
|---|
| |