| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0198 |
|---|
| Symbol | |
|---|
| ID | 4438552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptococcus thermophilus LMD-9 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008532 |
|---|
| Strand | + |
|---|
| Start bp | 163857 |
|---|
| End bp | 166397 |
|---|
| Gene Length | 2541 bp |
|---|
| Protein Length | 846 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 639675948 |
|---|
| Product | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein |
|---|
| Protein accession | YP_819716 |
|---|
| Protein GI | 116627097 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
|---|
| TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain
[TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGG ATCGTTATGT GACTCAATCC GCTGTTGTTT TGGGCCTTTT TGCTCTCTTG
ACTGTGCCAC AAGTTGTGGG GCATGCTGAT GAGGCAACGG CGCCAGTTCC AACTACCTCA
ACTGAAACTG TGACAGATAG TGGAGCTACT ATCGTATCAG GACAAGAAAC TTCGGGGACA
GCTGTTCAAG GAGGAACAGA GACTGTATCT GCTACACCAA CACCAGTAGC GACAAATGCG
TCTGTAGAAG CATCATCTTC TAGCTCAACA GCCCAAGCAA GTCAAGAAGC TAGTGCTATT
TTGACTAATG CCAATCAAGT GACACCAGCA GTGCCAGTAC AGCCTGAAAC CGTTACTGAA
CCTGCTCATG AGGGACAGGC TGTTGATATG CAGATTTTGT CAACAACAGA TATTCACACC
AACTTGGTTA ACTATGACTA TTATCAAGAT AAGCCGTCTC AAGCCGTTGG TCTGTCCAAA
ACTGCTGTCC TTATCAAAAA AGCCCGTGAA ACCAATCCCA ATACGGTCTT GGTGGACAGT
GGGGATACGA TTCAAGGAAC TCCTTTTGGA ACTTATAAGG CCTTGATTGA TCCTGTTGCC
CAAGGTGAGA CTCACCCTAT GTACAAGGCT TTTGAGATGC TTGGTTACGA TGCTGAAACG
CTTGGAAATC ACGAGTTTAA CTATGGCCTC GAATTTTTGG ATCGCATGGT TAAGACCGCT
AGGATTAACA TTATCAATGC TAATGTGCGC AATGCTCAGA CAGGTGACTA CTATTACAAT
CCCTATAAGA TTGTTAATAA GACCTTTACC GATACGGATG GCAAACAGGT AACGCTAAAA
ATCGGTATTA CTGGTGTCCT TCCAACGCAG ATTTTGGTTT GGGATAAGGC CAATCTTGAA
GGTAAGGTAA CTGTCGACGA TCCAATGGAG GCTGTTAAGA CTATTGTTCC TCAAATGAAG
GCTGCTGGGG CTGATTTTAT TCTTGTTGCT GCTCATTCTG GTATTGGCGA CAATGAATAT
ACTAAGAACG AGGAAAATGA AGGTTACCAA ATTGCTGGTA TCGAAGGTGT TGATGCTGTT
GCGACAGGGC ATTCTCATGC GGATTTCCCA AATGGTGATG GTACAAGTTT TTATGCCAAA
TATCCTGGTG TAGATGATGT CAATGGTCTC ATCAATGGGA AACCTGTAGT TATGGCTGGT
AAGTTCGGAG ATCATCTCGG TATCATGGAT GTCAAGTTGA CTTATACGGA TGGCAAATGG
AAAGTTGTCA ACAGTAAGGC CAAGCTTGAA AAAATTGATA CTAAGTCAGA TATTGCGGAT
AAAGCTCTAA TTGACATGGC TGCTCATGAC CACAATGGGA CAATCAACTA TGTTCGTAAG
GAGGTTGGTG AGACCACTGC CCCAATCACT AGCTATTTTG CTCAAGTTCA GGACGATCCA
TCTATTCAAA TCGTAAACAA TGCGCAATTG TGGTATGCCA AAAAACAAGT AGCGGGAACA
GCAGATGAAA ATCTACCAAT CCTTTCAGCA GCTGCACCTT TCAAGGCAGG GACTCGTGGG
GATGCAAGTT ACTACACTGA CATTCCAGCA GGTCCATTAG CCATTAAGAA TGTCGCAGAC
CTCTACCTCT ATGATAATGT CACTGCCCTT CTCAAGGTGA CTGGTGCGCA GATTAAAGAA
TGGTTGGAAA TGTCTGCAGG ACAGTTCAAT CAAATTGACC CTAACAGCAA AGAACCCCAA
CAACTCATTA ACAGTAGCTA TCGCTCATAT AATTACGATG TGATTGATGG GTTGACTTAC
AAGTTCGATT TAACGCAACC TAACAAGTAT GACCATGAAG GTAAGTTGGT TAACCCAGAT
GCCAGTCGTG TCCGTGATTT AGCTTATCAA GGTCAACCAA TTGATTTGAA TCAAACCTTC
CTTGTCGTAA CCAATAACTA CCGTGCGACT GGTAATTTCC CTGGTGTTAA GGATGCCGTA
GAAAAACGTC TTCTCAATCT TGAAAATCGT CAGGCCATCA TTGACTATAT TGTCAGTGAG
AAAACGATTA ATCCGAGTGC CGATGGGAAT TGGAGTTTCC TTCCAAACAT TGCAAATGCG
GATATCCGTT TTGCCTCATC GGACAATGCA CGTGCCCACC TTGCTAATCA GGATGCTATT
AGTTATGTAG GGGCATCAAC ACAGGCAGGA TTTGCGGAGT ACCGTTTGAT TGTTAAGGAA
AAAGCAAATC AAGTCGAGGA TATGGCTAAT AAAGAATCTG AGAAGTTATC AAAAGATGCT
GAGACAGTGG ATCAAACTAA GCGCGTGACA CCAAAGGTTA TCGAAGGGTC TAGCTTGGTT
AAACCAGCTA CAGCTATTCA GTTGTCAAAT TCTCAGGTAA TCATCTTGCC TCAAGCTCAA
ATCCAAGAAA CTCAAGTTTC AAGTTCTGCT GAGACTTTGC CAAATACAGG TTCGGATGAA
TCCATGTCAG CAACTTTAGC TGGTCTGGTT CTTGTGACCT TGGCTGGTTT CTTTGGAATC
AAGAAATACG AAAAAAATTA A
|
|---|
| Protein sequence | MKTDRYVTQS AVVLGLFALL TVPQVVGHAD EATAPVPTTS TETVTDSGAT IVSGQETSGT
AVQGGTETVS ATPTPVATNA SVEASSSSST AQASQEASAI LTNANQVTPA VPVQPETVTE
PAHEGQAVDM QILSTTDIHT NLVNYDYYQD KPSQAVGLSK TAVLIKKARE TNPNTVLVDS
GDTIQGTPFG TYKALIDPVA QGETHPMYKA FEMLGYDAET LGNHEFNYGL EFLDRMVKTA
RINIINANVR NAQTGDYYYN PYKIVNKTFT DTDGKQVTLK IGITGVLPTQ ILVWDKANLE
GKVTVDDPME AVKTIVPQMK AAGADFILVA AHSGIGDNEY TKNEENEGYQ IAGIEGVDAV
ATGHSHADFP NGDGTSFYAK YPGVDDVNGL INGKPVVMAG KFGDHLGIMD VKLTYTDGKW
KVVNSKAKLE KIDTKSDIAD KALIDMAAHD HNGTINYVRK EVGETTAPIT SYFAQVQDDP
SIQIVNNAQL WYAKKQVAGT ADENLPILSA AAPFKAGTRG DASYYTDIPA GPLAIKNVAD
LYLYDNVTAL LKVTGAQIKE WLEMSAGQFN QIDPNSKEPQ QLINSSYRSY NYDVIDGLTY
KFDLTQPNKY DHEGKLVNPD ASRVRDLAYQ GQPIDLNQTF LVVTNNYRAT GNFPGVKDAV
EKRLLNLENR QAIIDYIVSE KTINPSADGN WSFLPNIANA DIRFASSDNA RAHLANQDAI
SYVGASTQAG FAEYRLIVKE KANQVEDMAN KESEKLSKDA ETVDQTKRVT PKVIEGSSLV
KPATAIQLSN SQVIILPQAQ IQETQVSSSA ETLPNTGSDE SMSATLAGLV LVTLAGFFGI
KKYEKN
|
|---|
| |