| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | STER_0161 |
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| Symbol | hrcA |
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| ID | 4436990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptococcus thermophilus LMD-9 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008532 |
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| Strand | + |
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| Start bp | 133364 |
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| End bp | 134446 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639675914 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_819700 |
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| Protein GI | 116627081 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00204123 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGATTACGC AAAGGCAAAA CGCTATTTTG AATTTGATAG TTGAGATGTT CACTCGCACA
CATGAACCAG TTTGTTCTAA AGCATTACAA GACTCGATTG ATTCAAGTTC AGCGACCATT
CGTAATGACA TGGCTAAGTT AGAAAAGATG GGTTATCTTG AGAAAGCTCA TATCTCTAGT
GGACGCATGC CAAGCCGAGC GGGTTTCCAG TATTTTGTTG CTAATTCTTT GAATCTTGAT
ACGATTGATG AACAAGATGT TTACCAAGTC GTCAAGGCCT TCGACTTTGA AGCCTTTAAA
CTTGAAGATA TCTTGGATGC GGCGGCAAAG CTGCTGGCAG AAATGACAGG ATGCACAGCA
GTGATTCAAG ATGTGGAACC GACCAAACAG CGTCTGACAG GATTTGAGAT TGTTCAGCTG
TCTAATCACG ATGCGTTGGC AGTTCTGACT CTAGATGAAT CTAAGCCGGT GACAGTTCAG
TTTGCCATTC CAAAGAATTT CTTGTCAAGC GATTTGGAAA TTTTTCATAA GCTTGTTCAG
GGACGGTTTT TAGGAAATAC TGTCTTAGAT ATCCATTACC GATTGAGAAC AGAGACTCCT
CAGATTGTGC AAAAGTATTT TAAGATAACA GATAATGTTT TAGATTTGTT TGATTATATC
TTTTCACACC TCTTCAAGGA ACTGATTTTT ATAGAAGGTA AGGTTGCATC ACTGGCCTAT
GCTGATTTGA AAACTTATCA ATTTTTGGAT AATCCACAAC ATGTGGCTCT TGCGCTTCGA
TCAGCTATCT CCGATGATGA AGTGACCAAA ATTTCGGTCG CAGAATCAAC TGAAGAAGCT
CTTGAAAATG TCACGGTTAT GAGTCATAAA TTCTTGATCC CCTATCGTGG GACGGCACTC
ATGCATGTGA TTGGACCCAT TGAAATGGAT TATCGTCGCA TGGTTAGTTT AGTCAACGTT
ATCAGTCGAG TTCTGGTTAT GAAATTAACG GATTATTACC GTTATCTCAA TAGTAACCAT
TACGAAGTTT TCTTAAGCCG TAACGTTTTA AAAAATATAG AAAGAGGTGA ATGCCTTGAC
TGA
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| Protein sequence | MITQRQNAIL NLIVEMFTRT HEPVCSKALQ DSIDSSSATI RNDMAKLEKM GYLEKAHISS
GRMPSRAGFQ YFVANSLNLD TIDEQDVYQV VKAFDFEAFK LEDILDAAAK LLAEMTGCTA
VIQDVEPTKQ RLTGFEIVQL SNHDALAVLT LDESKPVTVQ FAIPKNFLSS DLEIFHKLVQ
GRFLGNTVLD IHYRLRTETP QIVQKYFKIT DNVLDLFDYI FSHLFKELIF IEGKVASLAY
ADLKTYQFLD NPQHVALALR SAISDDEVTK ISVAESTEEA LENVTVMSHK FLIPYRGTAL
MHVIGPIEMD YRRMVSLVNV ISRVLVMKLT DYYRYLNSNH YEVFLSRNVL KNIERGECLD
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