| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0154 |
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| Symbol | |
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| ID | 1172577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | - |
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| Start bp | 143635 |
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| End bp | 145176 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637346593 |
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| Product | heavy metal efflux protein, putative |
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| Protein accession | NP_720470 |
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| Protein GI | 118725042 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.235604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAT TTAATACAGT AAAAAAGCAG GCCCCTAAGG CCGTACTGAT CTTGAGTAGC
TTACTCATCA GTACGCCTTG GTTGAGCCAT GCCCAGCTGG CGAACACACA AGAGCACACG
GCGACCGAAG CGGCAGCAAA TTCTGCAACT GCGCCTAAGA ATAATCTGTT AAATCAAGTC
AAAACCTACA CTTGTCCTAT GCATCCCGAA GTGATCAGCC ATGAGCTGGG TCGCTGCCCT
AAATGCAATA TGTTTTTAGT TGAGAAACTT GATGCCTCGA ACCCTGCGGC CGAGCATGCA
CAGCATCAAG CCGCAGATCA CCAAACCTCT GAGCATGGGC ACACCTCTGC CGCCAAAGCT
GCGAGTCAGG TATTCGATAC CCCAACACCT AAGGCCGACA GTTTAGTTAA AGCTCAAAAT
AACGAGACAA CAATCAAGTA CGTTTGCCCT ATGCATACCC ACATTATCAG TGACGTACCC
GGCACTTGCC CTATCTGCGG TATGAACTTA GAAAAAGTCG AAACGGGCGG CAATACCCAA
GAAATCAACA TCAATGTATC CGGCAGCATG CAGCAAGCGT TGGCGTTAAA GGTGGCCAAG
GTTGAACGCG ACACACTGTG GAAATTTGTC GAAACCGTCG GTCAAATCGA CTATGACGAA
AGCCAAATCA CCCATATCCA TGCCCGCGTT ACTGGCTGGA TTGAAAAACT GATGCTCAAA
TCCGTGGGTG ATACCGTCAA GAAAGACCAA CTGATCTACG AGATCTATTC CCCCGATTTA
ATCAACGCCC AAGATGACTA CCTGCTCGCT ATGGATACTG CTAAAGCAAA CGGCCAAGGC
CGCTACAAAG ATTTGGTGCG CAATGCGGGC TTACGCTTAT CCTTTCTTGG CTTTAACGAC
AGGCAAATCA AACAATTAGC CGAGTCACAT CAAACCCAAT ATCGAGTACC TTTCTACGCC
AAAGAAGACG GCATAGTGAA GGCTCTCGAC ATTCGCGATG GCATGTATAT TCAACCGTCG
ACCGAAGTCA TGTCTGTGGT GGATCTCTCT AAAGTCTGGG TGATTGCCGA CGTCTTTGAG
AACGAGCAAA GCTGGATTGC CAAAGGTCAG AAGGCCGAAA TTGCCGTTCC CGCCATGAAT
ATCAGCGGTA TCGAAGGCAC GATCGATTAC ATCTACCCTG AGCTTGATCC TGTCACTCGC
AGCCTGCGAG TACGAGTCGT GCTCAACAAT ACCGAGGTAG ATTTAAGACC TAAAACCCTC
GCCAAAGTCT CACTATTCGG TGGCCCGAAT AAAGATGTGC TAGTAATCCC GCAGGAAGCT
TTAATTCAAA CGGGCAAAGA AAACCGCGTG ATCGTCAAGC AAACCGACGA CAGTTTTACC
GCCAAGGCCG TAACTGTCGG CATGATGAGC CAAGGTAAGG CCGAGATTAT TTCAGGCCTG
AATGAAGGTG AACGTGTGGT GATTTCGGGG CAATTCTTAC TCGACTCCGA GGCTAGCCTC
AAGGGCAGTT TAATGCGTTT AAGCAGCGGT CATCAGCACT AG
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| Protein sequence | MNQFNTVKKQ APKAVLILSS LLISTPWLSH AQLANTQEHT ATEAAANSAT APKNNLLNQV
KTYTCPMHPE VISHELGRCP KCNMFLVEKL DASNPAAEHA QHQAADHQTS EHGHTSAAKA
ASQVFDTPTP KADSLVKAQN NETTIKYVCP MHTHIISDVP GTCPICGMNL EKVETGGNTQ
EININVSGSM QQALALKVAK VERDTLWKFV ETVGQIDYDE SQITHIHARV TGWIEKLMLK
SVGDTVKKDQ LIYEIYSPDL INAQDDYLLA MDTAKANGQG RYKDLVRNAG LRLSFLGFND
RQIKQLAESH QTQYRVPFYA KEDGIVKALD IRDGMYIQPS TEVMSVVDLS KVWVIADVFE
NEQSWIAKGQ KAEIAVPAMN ISGIEGTIDY IYPELDPVTR SLRVRVVLNN TEVDLRPKTL
AKVSLFGGPN KDVLVIPQEA LIQTGKENRV IVKQTDDSFT AKAVTVGMMS QGKAEIISGL
NEGERVVISG QFLLDSEASL KGSLMRLSSG HQH
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