| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0049 |
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| Symbol | |
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| ID | 1172472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | - |
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| Start bp | 38936 |
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| End bp | 41113 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637346508 |
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| Product | toxin secretion ABC transporter, ATP-binding subunit/permease protein, putative |
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| Protein accession | NP_720385 |
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| Protein GI | 24376277 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.41671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATTG CAACTGACAA ACATGCCGCC TTGATGGCAA GCGAGAGCAA TAGTCCCGTT
GACTTACTTG AGTTCTCTGG CAATAAGCGT GTGCCACTTA TTTTACAAGC TGAAATGGCG
GAATGCGGTC TTGCCTGTAT GGCGATGATA GCAAGCTTCA ACGGTCACAA GTTAGACATG
GCGGCGTTAC GCAAGCGCTT CACCGCTAAT TTAAAAGGGA TGAATTTACA GCAGTTAATT
TCATTAGGTG ATTCTATTGG ACTCTCCAGT CGAGCGCTCA AGTGCCCGTT GGAAGAGGTA
GGTAAGTTAG CACTACCTTG TATTCTCCAT TGGGATATGA ATCACTTTGT TGTACTCACT
GGTGTCACTA AAAAAAGCAT CAGCATAAAT GACCCTGCTG CTGGTAAACG CACCTTATCG
CTGCAGGAAT TTGCTAAACA TTTTACAGGA ATTGCACTTG AGTTGACACC GACGAAGGCG
TTTGTAAAAC AAGATGAACG CCAGCAAATG CGATTAAGCC AACTGTGGAC CAAAATCAGT
GGCGTTAACG CAGCGTTGAT AACATTGCTG CTCTTATCCG TATTATTACA GGTATTTGCG
TTAGTCACGC CTTATTACAT GCAATGGGTG GTTGATGAGG TATTGGTGAG TCAGGACCAG
CCTTTGCTGA TTGTGCTAGC CATTGGCTTC GGGCTGTTGG TGGTGATAAA CGTGTTTACC
ACCGGTGTGC GCAGCTGGCT AGTGTTAAGG GTTTCTAGCC TATTGAATAT GCAAATGGGG
GTTAATTTAC TGCGCCATCT ATTGCGCTTA CCCATGAACT ATTTTGAAAA GCGGCATATT
GGTGATTTAG TGTCGCGTTT TGGCTCTTTG GCACAAGTAC GTGAGCGGCT AACGACAGGC
CTAGTTGAAA CGGTTGTTGA TGGAGTCATG TCCATTGCGG TTTTAGTGAT GATGCTGATT
TACAGTGTAA AACTCACGCT TGTCGTCATG GCTGCTGTGG CATTGTATAC CTTGATGCGT
TTCGCATTAT ACAGGCCACT TCATCGAGCC ACAGAAGAGT CGATTCAAGC AAAAGCAAAA
GAGCAAAGTA ACTTTTTGGA AAATATCCGA GGTATTCAAA CCATCAAGTT ATTTACCTGT
GAAAGCGCTA GGCAAGGTAT TTGGCAAAAT CGCTACAGTG AAGTCATCAA TGCTGACATT
CGTTTAGGTA GGCTAAAAAT CAGCTTCGAT GCAATGAACA AACTGTTGTT TGGAGTTGAA
AATATCATTG TGATTTACAT GGCGGCAATG ATTGTCATGA GTGGTGGCCT CACCATCGGC
ATGGTATTAG CCTTTATTGC TTACAAAAAT CAAATGACTG AGCGAGTGGC AAGCTTAATT
GAACAGTTAA TTATGTTTCG TATGTTGCGA TTACACCTTG ACCGTATCTC TGACATTGCT
CTCCACGAGC AAGAGGCTCA TCAAGAAGGC TTTACACCGC TCAATGTTGT CAAAGGGCGC
TTAAGTTTAG AGAACGTAAG CTTTCGTTAT GGTGAAAATG AGCCCGAGGT GGTTAGCAAC
CTGAGCCTCG ATATTCAGGC GGGAGAATCT GTCGCTATAG TGGGGGCTTC TGGTTGTGGC
AAGACCACCT TAGTGAAACT GATGCTAGGG CTATTAGTCC CCTCGAGTGG ACGTATTTTG
CTCGATGGCC AAGCGATACA ACAGATTGGA TTAACACAAT ATCGGCAGCA AATCGCAGCC
GTTATGCAGG ACGATACTCT GCTTTCAGGC TCGATTGCTG ACAATATTAC GTTTTTCGAC
CCTGAGCCTA ATTACGTAAA AATGCAACAA TGTGCACAAT TGGCGGTGAT TGATATGGAT
ATCGCACATA TGCCCATGGG GTATAACAGT TTAGTGGGCG ATATGGGGAA TCAGTTTTCG
GGTGGGCAAG TACAGCGTTT ATTGCTAGCA CGAGCCTTAT ATCAGTCACC CTCGATTTTG
TTTATGGATG AAGCTACAAG TCATCTCGAC ATTATGAATG AGGCTAAAAT CAGTGAGCAG
ATAAAAAACC TAAATATGAC CCGCATTATC ATTGCCCATA GACCAGAAAC CATTAAGCAG
GCAGATAGAG TGGTTGTGAT GCATCAAGGG AAAATAATGA CTGCTGAAGA ATTACAGCAA
GCCCAGTCCG CGTCATAA
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| Protein sequence | MTIATDKHAA LMASESNSPV DLLEFSGNKR VPLILQAEMA ECGLACMAMI ASFNGHKLDM
AALRKRFTAN LKGMNLQQLI SLGDSIGLSS RALKCPLEEV GKLALPCILH WDMNHFVVLT
GVTKKSISIN DPAAGKRTLS LQEFAKHFTG IALELTPTKA FVKQDERQQM RLSQLWTKIS
GVNAALITLL LLSVLLQVFA LVTPYYMQWV VDEVLVSQDQ PLLIVLAIGF GLLVVINVFT
TGVRSWLVLR VSSLLNMQMG VNLLRHLLRL PMNYFEKRHI GDLVSRFGSL AQVRERLTTG
LVETVVDGVM SIAVLVMMLI YSVKLTLVVM AAVALYTLMR FALYRPLHRA TEESIQAKAK
EQSNFLENIR GIQTIKLFTC ESARQGIWQN RYSEVINADI RLGRLKISFD AMNKLLFGVE
NIIVIYMAAM IVMSGGLTIG MVLAFIAYKN QMTERVASLI EQLIMFRMLR LHLDRISDIA
LHEQEAHQEG FTPLNVVKGR LSLENVSFRY GENEPEVVSN LSLDIQAGES VAIVGASGCG
KTTLVKLMLG LLVPSSGRIL LDGQAIQQIG LTQYRQQIAA VMQDDTLLSG SIADNITFFD
PEPNYVKMQQ CAQLAVIDMD IAHMPMGYNS LVGDMGNQFS GGQVQRLLLA RALYQSPSIL
FMDEATSHLD IMNEAKISEQ IKNLNMTRII IAHRPETIKQ ADRVVVMHQG KIMTAEELQQ
AQSAS
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