Gene SO_4652 details

Gene Information

• Locus tag: SO_4652
• Symbol: sbp
• ID: 1172234
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4848018
• End bp: 4849031
• Gene Length: 1014 bp
• Protein Length: 337 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637346360
• Product: sulfate ABC transporter, periplasmic sulfate-binding protein
• Protein accession: NP_720168
• Protein GI: 24376125
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG1613] ABC-type sulfate transport system, periplasmic component
• TIGRFAM ID: [TIGR00971] sulfate/thiosulfate-binding protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATTT TATCTCGGTT ACAACAAGCA ACACTTGCCC TAACATTCAC CTCAGTTAGC 
TTTCTTGCGC TTGCTGAAAA TACTTTGTTG AATGTTTCCT ATGATCCAAC CCGAGAATTT 
TATCGGGAAT ATAACCAACT TTTTAGTCAA TATTGGCAAA AACAAGGCCA TGAAGCTCCT 
ACCGTCCGTC AATCTCACGG TGGTTCAGGC TCGCAAGCTC GCTCAGTTAT CGATGGCTTA 
GAAGCGGACG TTGTAACACT GGCATTGGCC TATGACGTTG ATGCATTGAG ACAAAAAGCA 
GATTTAATTC CTGAAAATTG GCAAAGCCGC CTCCCTCATA ATAGCTCTCC TTACACTTCA 
ACTATTGTGT TACTAGTACG TAAAGGAAAT CCCAAGAATA TCCATGATTG GAATGATTTA 
GCCCGCAAAG GTGTAGAGGT TATTACCCCG AATCCTAAAA CATCGGGCGG GGCACGTTGG 
AACTACCTCG CCGCTTGGGG ATATGCACTG AAGCAATACG GCTCTGAAGA AAAAGCCTTA 
GAGTTTGTCA CGCAAATTTA TAAAAACGTA CCAGTGCTTG ACTCAGGCGC CCGCGGTGCA 
ACCAATACTT TTGTACAGCG ACAAATTGGT GATGTTTTTA TCGCTTGGGA AAACGAAGCA 
TTTCTTGCTG TCGAACAATT AGGTAAAGGC GAGTTTGAGA TTATTGTCCC GAGTGTCAGT 
ATTCTTGCTG AGCCACCAGT CGCTATTGTC GATAAAAATG TTGATCGCAA AGGAACACGC 
AAACTGGCAG AAGCCTATTT AGCTCAGCTT TATACTGATG AAGCGCAACA TCTTGCTGCA 
AAACACTTTT ATCGCCCAGC TAACCCAAAT ATTTCTAAAC AATATAAGGA TAAGTTTCCC 
CAATTAACCT TGTTTACCAT TGATGATGTC TTCGGTGGCT GGAACAAAGC ACAACAAACT 
CATTTCAATG ATGGTGGTTA TTTCGACACC ATTCTAACCA AAATCAGTAA ATAA 

 

Protein sequence

MSILSRLQQA TLALTFTSVS FLALAENTLL NVSYDPTREF YREYNQLFSQ YWQKQGHEAP 
TVRQSHGGSG SQARSVIDGL EADVVTLALA YDVDALRQKA DLIPENWQSR LPHNSSPYTS 
TIVLLVRKGN PKNIHDWNDL ARKGVEVITP NPKTSGGARW NYLAAWGYAL KQYGSEEKAL 
EFVTQIYKNV PVLDSGARGA TNTFVQRQIG DVFIAWENEA FLAVEQLGKG EFEIIVPSVS 
ILAEPPVAIV DKNVDRKGTR KLAEAYLAQL YTDEAQHLAA KHFYRPANPN ISKQYKDKFP 
QLTLFTIDDV FGGWNKAQQT HFNDGGYFDT ILTKISK