| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4629 |
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| Symbol | |
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| ID | 1172212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 4825116 |
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| End bp | 4827470 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637346338 |
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| Product | hypothetical protein |
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| Protein accession | NP_720145 |
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| Protein GI | 24376102 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGACTA TTGCCCAAAT TATTGCTCAG GAACTCAATG TTCGTGAGCA TCAAGTCACT
GCCACCATAG ATTTGCTCGA CAATGGTGCT ACTGTTCCCT TCGTTGCCCG TTACCGTAAA
GAGGCGACGG GTGGGTTAGA CGACACCCAG TTACGTACGC TGCACAGCCG TTTAGGTTAT
TTGCGTGAGT TAAATGACAG ACGTCAGGTG ATTTTATCCA GCATTCAAGC GCAGGGTAAG
TTAACGCCTG AGTTGCAACG GGAAATTGAC GGCGCCGATA GCAAGACGCG TCTCGAAGAT
CTGTATCTTC CCTTCAAACC TAAGCGCCGC ACCAAGGGCC AAATTGCCAT TGAAGCGGGA
TTAGAGCCGC TGGTTGAAGC CTTGTTGGCG GATCACAATG CCGATATTGA AGCATTGGCT
GCGGGTTATT TGAATCTGGA AGCGGGTTTT AGCGACACCA AAGCGGTGCT GGAAGGCGCC
CGTTACATTC TGATGGAGCG TTACGCCGAA GATGCGGAAT TACTGCGTAA AGTCCGTGAA
CACTTAAGCC AAAACAGTGT GTTAGAGAGC CGAGTTATCG CCGGCAAAGA GAAGGAAGGC
GCGAAGTTTC GCGATTATTT CGAGCACAAC GAACCTTTGG CAAAAGTGCC ATCTCACCGC
GCCTTAGCCA TGCTGCGTGG TCGTAATGAG GGTTTCCTGT CGTTATCCAT GAATGCCGAT
CCTGGTGCAG AGGCCGGTCA AGGCAGTTAC TGCGAAGTCA TTATTAGTGA GCACTTAGGC
TTAAAATTGA CGGATAGCAG TGTGGATCAG TGGCTCAAAA CGGTTGTCAC TGCCACATGG
CGAATTAAAA TTGCCCTGCA AATGGAAACC GAGTTTATCT CGCAAATGCG TGAGCGCGCA
GAAGCGGAAG CCATTAACGT GTTTGCCCGT AACTTAGGTG ATTTATTGAT GGCCGCGCCA
GCGGGTGCCA AGGCAACCAT GGGCCTCGAC CCTGGTCTTC GTACTGGCGT TAAAGTGGCC
ATCGTGGATA ACACCGGTAA ATTGGTGGCG CACACGACTA TCTTCCCCCA TGCGCCACAG
AATTTATGGG ACAAGTCGAT TCGTACCCTC GCCAACTTAG TGCAAATGCA TAAGGTAGAG
TTAATCGCGA TTGGTAATGG TACCGCATCC CGCGAAACCG ATAAATTAGC GGCTGAGTTG
ATTGCCAGCC TCAAGGACAG CCAACCACAG CTAACCAAAG TGATGGTGAG CGAAGCGGGC
GCCTCGGTGT ATTCCGCATC AGAACTGGCG GCACTAGAAT TCCCTGAGCT AGACGTTTCG
ATTCGTGGCG CGGTCTCAAT TGCCCGTCGT TTACAGGACC CATTAGCGGA ACTGGTGAAG
ATTGAGCCTA AGTCTATCGG CGTTGGCCAA TATCAGCACG ATGTGAGTCA AAGCCAGCTT
TCTAGCTCGC TTGAAGCCGT GGTCGAAGAC TGTGTAAACG GCGTGGGCGT GGACTTAAAC
ATGGCGTCTG TGCCTTTGCT ATCGCAAGTT GCGGGTTTAA ATAAAACCTT GGCCAAAAAC
GTGGTTGATT ACCGCGATGC CAATGGCGCA TTTAAAAACC GTAAAGAGCT GTTAAAAGTG
CCGCGTTTAG GCCCTAAAGC CTTTGAGCAA GCCGCAGGCT TTTTACGTAT TCGCCATGGC
GATAATCCAT TAGATATGTC AGCAGTTCAC CCCGAAGCTT ATTCGCTAGT TGAAACCATT
GCCAAGACCA AACAGGTGGA ATTGTCGAGC TTAATTGGCA ATTCGGAGTT ACTGCGTAGC
ATCAAACCGC AGGAGTTTAT TACGCCAGAG TTTGGTTTGC CGACAGTGAC TGACATCCTT
AGCGAGCTGG ATAAACCTGG CCGCGACCCC CGTGGCGAGT TTAAGACTGC TAAGTTTAAG
GATGGAGTTG AAGAGCTTAA GGATCTCAAG CCTGAGATGA TCCTCGAAGG CGTAGTCACC
AACGTGACTA ACTTTGGTGC CTTTGTGGAT ATCGGCGTGC ATCAAGATGG TTTAGTGCAT
ATCTCGTCAT TAACCGACAA GTTTATTACC GATCCCCATA CCGTGGTTAA AGCGGGTGAT
GTGGTCAAAG TGAAGGTGAT GGAAGTCGAT GTGGAGCGTC GCCGAATTGG TCTGAGTATG
CGTCTGGATG AGGCGATTGA TCAGAGCAAG ACGCAAACTC GTGCGCCTGC GCAGGGGAAG
CATCAGGCTA ACAAGCCGAA TCAACAGCAC AAATCAGCAC AACATCAGTC GGGGCGTCCA
GCACCTAAGT CCGTCCCTGT CAATGCGGCA ATGGGTAATG CCTTTGCCGA TGCCTTCGCT
AAGCTTAAAA AGTAA
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| Protein sequence | MQTIAQIIAQ ELNVREHQVT ATIDLLDNGA TVPFVARYRK EATGGLDDTQ LRTLHSRLGY
LRELNDRRQV ILSSIQAQGK LTPELQREID GADSKTRLED LYLPFKPKRR TKGQIAIEAG
LEPLVEALLA DHNADIEALA AGYLNLEAGF SDTKAVLEGA RYILMERYAE DAELLRKVRE
HLSQNSVLES RVIAGKEKEG AKFRDYFEHN EPLAKVPSHR ALAMLRGRNE GFLSLSMNAD
PGAEAGQGSY CEVIISEHLG LKLTDSSVDQ WLKTVVTATW RIKIALQMET EFISQMRERA
EAEAINVFAR NLGDLLMAAP AGAKATMGLD PGLRTGVKVA IVDNTGKLVA HTTIFPHAPQ
NLWDKSIRTL ANLVQMHKVE LIAIGNGTAS RETDKLAAEL IASLKDSQPQ LTKVMVSEAG
ASVYSASELA ALEFPELDVS IRGAVSIARR LQDPLAELVK IEPKSIGVGQ YQHDVSQSQL
SSSLEAVVED CVNGVGVDLN MASVPLLSQV AGLNKTLAKN VVDYRDANGA FKNRKELLKV
PRLGPKAFEQ AAGFLRIRHG DNPLDMSAVH PEAYSLVETI AKTKQVELSS LIGNSELLRS
IKPQEFITPE FGLPTVTDIL SELDKPGRDP RGEFKTAKFK DGVEELKDLK PEMILEGVVT
NVTNFGAFVD IGVHQDGLVH ISSLTDKFIT DPHTVVKAGD VVKVKVMEVD VERRRIGLSM
RLDEAIDQSK TQTRAPAQGK HQANKPNQQH KSAQHQSGRP APKSVPVNAA MGNAFADAFA
KLKK
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