Gene SO_4485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4485 
Symbol 
ID1172080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp4673365 
End bp4673928 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content48% 
IMG OID637346201 
Productdiheme cytochrome c 
Protein accessionNP_720006 
Protein GI24375963 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAC CAACCCACAC CCTAAGCTGG ATTGCAGGAA GCACACTCAC TGCCCTCGCC 
CTAACGATAG GTATTATCGG GATCAGTTTA ACCTTCTCAA GTACGGGTTA TGCCGATGAT 
GGTCGCGAGC TGAATCAAGC CATCCCACAA AATGCTGAAT ATTCAGCTGA ATGCGGTAGC 
TGCCATATGG CGTATCCCGC AAATTTACTG CCCGCCGACA AGTGGCAGGC AATCACGGGC 
AATCTAAACA ACCACTTTGG CGATAATGCC AGTCTCACAC CTGAGGCAAC GGCGAGAATT 
GAGCAATATC TCACTCAACA TGCGGCACAA AATGGTAAGG TGATGAAAAA TAGCAAACCA 
TTGATTGCCG GAATGGGACC TCAAAAAATT ACCGAGCAGG CATTTTTTAT CCGTAAACAT 
GATGAGATCC CAAGGCGCAT GGTGCAAGAT AACCCCAAAG TCGGCTCATT CAGCCAATGC 
AGTAACTGCC ATAACCTCGC AGAGAAGGGC ATATTCGATG AAGATACCGT TAATATTCCT 
GGCGTTGGTC GTTGGGATGA TTAA
 
Protein sequence
MTKPTHTLSW IAGSTLTALA LTIGIIGISL TFSSTGYADD GRELNQAIPQ NAEYSAECGS 
CHMAYPANLL PADKWQAITG NLNNHFGDNA SLTPEATARI EQYLTQHAAQ NGKVMKNSKP 
LIAGMGPQKI TEQAFFIRKH DEIPRRMVQD NPKVGSFSQC SNCHNLAEKG IFDEDTVNIP 
GVGRWDD