| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_4439 |
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| Symbol | |
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| ID | 1172036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 4627121 |
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| End bp | 4629589 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637346157 |
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| Product | hypothetical protein |
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| Protein accession | NP_719960 |
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| Protein GI | 24375917 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCATCTT TGATCCTGAC GATCCTGATC GCAACGCTAA TCTTTAGCTC TTGCTCTTTG
GCGAGTAATA CGTCATCGGA CTTGCTAAAG CTGCTAAAGC AATATCAAGA CTTGCCTGAT
GGATTTTCTG AGCATTTTTT CAATGCCCCA TTAACAGTAA GAATCACCAT TGATAATAAA
TTGCTTGGCG AAGGTGAAAT AGTGTTAGGA CTCGATACCA GTGTGCAACT ATTAAAACTC
ATAGACGTGA GCGAAAGCGA TCTTGACGAA CGTCAGCAAC AATTATGGAT AGCGCAATTA
AACCAAAAAC ATAAGTTGGG TTTGTGCCAA AAAGGCTGTC AGGGCGGCAT ATTAGCGATT
GAATATAATT TGGAGAACTC TCAATTATCT ATTTTAACGG CCAATATCGA AAAACAACCA
TCAAGCTCGC ACTACTATGC CTTGCCTGAA CAGGGAAGCT ACGGCGCGCT ATTTCGACGA
CAACTCAATT GGAGTCAATC CAATGAGAGC GATTACGCAG GCCGTTATAA TTTGCAAGCC
CAAGCAAGTA TAGGCCAGTG GACCACACTG CTTGAAGGTG AAGTCACTCA AAATAATGAA
GAGACACTCA ACTCGACTAT TCAACAGTTG TATACAGAAC GTCAAAACGA AGGACACTTC
TATCGACTCG GGTATTTCTC CCCTTATGCC CAAGGTTTAG TTCGTCAGCC CATCATTTAT
AGCGGCAGCT CACAAGCTGT GATGGGCGTG ATGCTGGGTG ACTCTAATCA GTTATTGGTC
GATCAAGCCT ATGCCAGTGC CACACCCATT TATGTCACTC CGAATCGTGC AGGTGTGGTA
GAAATCTACC AAAATGGACA ATTGATCAAC TCGCAACAGA TTAACGCGGG CTTACAAGCC
ATTGATACAA AAGTATTACC ATCTGGCATA TATGAAGTTG AAATTCGTAT TCTAGAAGAT
GGCCAAGTCA CTGAACGTCG TCGAGAAATC ATTAACAAAC CCATTCAATG GCAAAACACT
GAAGAACCCT TTCGGGTGAA CTTGTTTGCT GGAGAAAAGT TACAAGACAT AACGAATTGG
GATGATGAAA GCAGACGCGG ACTCAGCACA GGGGTACTCG CAAACTACTT ATTAACACCG
GCGATCATCC TCGGCGCAGC GGCCCAATTT GTTGATAAAG GTTGGCATTA TAGCGTTTCG
GCCGATTGGG ACTGGAACCA ACAACTGCGC TTTTTTGGTA ACTGGGTGAT GAATGATCAA
CAGGGCAGCG ATTTTGATTT GCAAGCAGTT TATAGCTACA GGCAAGGTAG TTTTGTACTC
AGCCATCAGC AACAACTCAG CCAATCGCAA AGCAGTGATA TTACGAACTC TAATCCCAAA
AAGACGAGTG CATCGCTGCA ACATAACCTA GGGAGAGGTC ACTCTGTTTC TGCTTATTTG
TCACATCAAT CCGAGCAAGG TCAAGGCATT GACTTAGGTT GGCAGTACAG CGGCAAACTC
TGGGGACGCC AAATGAGCTG GAGTTTAAAT GCGTTCGATC GTCCCGGCAG CATTAACACT
TCAGGCCAGC GCGACCAAGG CGGAGCACTT TATTTCAGTA TGAACTTAGG CGATCAAAAG
CGTCGAATGG GTGGTGGCTT AGGCAGCAGA ACTTCACGTT CTGGCGGGCA AGAACAGCAT
GCCTATGTTG ATTACCAACA GCAACTAGAC TGGCGTGGCA TTGAAACCAT AGGGATGGGA
CTAAACACGG ATAGCTATGG TGTTGGCGCA ACCGCCAATA GCCGCTTTAG CAACAATATT
GTTAGCGGGG ATGCCTATGC ACAATCATCG TCCTATAACA GCGGCATCAC AGGAGGTATC
AACCTTGATA GTATGGTTGC ACTAGGGCAA CAGGGTAAAC TCGGCATCTC AGGCCAAAGC
CAAAACCACG ATGCGGGCAT GATAATCGAT GTCATGGCTG ATACCCCTGA CATCATTTTA
CAAGCAGAAG ATGAGCACGG TGGCAGTGTC ACCTTAAAGC CTGGACGCAA CTTAGTGCCA
GTGACCGCCT ATCGCAGTGG TAGCGTACAA CTCGCCATAC AGGACTACGA TGACACACCT
TCAGTCATCC AACCGAGCGT ATTGCATTAC CACCTCAATA AGGGAGGCGT CAGTTACCAA
CAAATCAGAG TCATGAAGAC TGTCACAGTG ATTGGTCGCT TAGTAAATCA ACAGGGATTG
CCGCTTAAAG GCGCGCTCAT CGCCAACCAT GCGGGGCGCA GCCTGAGTGA GGCCGATGGC
TTTTTTGCCG TAGAAATGAG TGAACGCCAC CCGAGCTTGC AAGTGGAGTA TCAAGGTGTA
CAAGAGTGCA ACCTTGAACT CGATTTACAC CGAGTAAAAC GTGAACAGAA CCTATTGCTA
GTAGGCAATA TCACTTGCAA CGCCCAAGCA TGGGCACAGC AAACATTAAC AGAGAACCTA
GCCAAGTGA
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| Protein sequence | MSSLILTILI ATLIFSSCSL ASNTSSDLLK LLKQYQDLPD GFSEHFFNAP LTVRITIDNK
LLGEGEIVLG LDTSVQLLKL IDVSESDLDE RQQQLWIAQL NQKHKLGLCQ KGCQGGILAI
EYNLENSQLS ILTANIEKQP SSSHYYALPE QGSYGALFRR QLNWSQSNES DYAGRYNLQA
QASIGQWTTL LEGEVTQNNE ETLNSTIQQL YTERQNEGHF YRLGYFSPYA QGLVRQPIIY
SGSSQAVMGV MLGDSNQLLV DQAYASATPI YVTPNRAGVV EIYQNGQLIN SQQINAGLQA
IDTKVLPSGI YEVEIRILED GQVTERRREI INKPIQWQNT EEPFRVNLFA GEKLQDITNW
DDESRRGLST GVLANYLLTP AIILGAAAQF VDKGWHYSVS ADWDWNQQLR FFGNWVMNDQ
QGSDFDLQAV YSYRQGSFVL SHQQQLSQSQ SSDITNSNPK KTSASLQHNL GRGHSVSAYL
SHQSEQGQGI DLGWQYSGKL WGRQMSWSLN AFDRPGSINT SGQRDQGGAL YFSMNLGDQK
RRMGGGLGSR TSRSGGQEQH AYVDYQQQLD WRGIETIGMG LNTDSYGVGA TANSRFSNNI
VSGDAYAQSS SYNSGITGGI NLDSMVALGQ QGKLGISGQS QNHDAGMIID VMADTPDIIL
QAEDEHGGSV TLKPGRNLVP VTAYRSGSVQ LAIQDYDDTP SVIQPSVLHY HLNKGGVSYQ
QIRVMKTVTV IGRLVNQQGL PLKGALIANH AGRSLSEADG FFAVEMSERH PSLQVEYQGV
QECNLELDLH RVKREQNLLL VGNITCNAQA WAQQTLTENL AK
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