Gene SO_4420 details

Gene Information

• Locus tag: SO_4420
• ID: 1172017
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 4612038
• End bp: 4612550
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637346140
• Product: M24/M37 family peptidase
• Protein accession: NP_719943
• Protein GI: 24375900
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0739] Membrane proteins related to metalloendopeptidases

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACTGA AATATATCAC CCTCGTTATC GCACTTTTTA TCCTTGCCGG ATGCCTAGTG 
CCAGAGCAGC CTATCATCCC CGTAAAAGGT GCCACGAATA AGGATTGGAA TAGCCAAACT 
TTTTGGTATG AGCCTTGGGG AAGTTCGGGC ACACACAAGG GTATCGATAT TTTTGCAACC 
ACGAATACTC CCGTTATCGC GCCCACGCCC ATGCTACTGC TGTACAAAGG TGACTTTTTT 
AAAGGCGGAA AAGTCGTCGT TGGACTAGGA CCAAATTGGC AAATCCATTA TTTTGCTCAC 
CTCGATAGTA TTGAGACATC GACAGGCTTA TTCGCCACAC GTGGAGAAAC GCTAGGTACC 
GTCGGCAGCA CTGGCAATGC TCAAGGTAAG CCGCCCCATT TGCACTATTC CATTTTAAGC 
CTGTTCCCAA GACTTTGGCG AATAGACACT TCAACTCAAG GATATAAAAA GGCTTTTTAT 
CTCAATCCCA TTGAGTATTT AGAGGCTAAG TAG 

 

Protein sequence

MKLKYITLVI ALFILAGCLV PEQPIIPVKG ATNKDWNSQT FWYEPWGSSG THKGIDIFAT 
TNTPVIAPTP MLLLYKGDFF KGGKVVVGLG PNWQIHYFAH LDSIETSTGL FATRGETLGT 
VGSTGNAQGK PPHLHYSILS LFPRLWRIDT STQGYKKAFY LNPIEYLEAK