Gene SO_4413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_4413 
Symbol 
ID1172012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp4606608 
End bp4607744 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content51% 
IMG OID637346135 
Productkynureninase 
Protein accessionNP_719936 
Protein GI24375893 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTTAA ATGTAAAACA GGACTTTTGC CTTGCAGGCC CTGGTTATCT GCTTAACCAT 
TCTGTGGGGC GACCGCTTAA ATCAACCGAG CAGGCGCTTA AGCAGGCGTT TTTTGCGCCT
TGGCAGGAGT CTGGGCGTGA GCCTTGGGGT CAATGGCTAG GCGTAATCGA TAACTTTACC
GCGGCGCTGG CGAGCTTATT TAATGGTCAG CCACAGGATT TTTGCCCGCA GGTGAATCTT
TCGAGCGCTT TGACCAAAAT CGTAATGTCC CTCGATAGAT TAACGCGGGA TTTAACTCGA
AATGGCGGCG CCGTGGTGCT GATGAGCGAA ATTGATTTTC CTAGCATGGG ATTCGCCCTT
AAAAAGGCAT TGCCCGCAAG CTGCGAATTG CGCTTTATTC CCAAGAGTTT AGATGTTACT
GACCCCAATG TGTGGGATGC GCATATTTGC GACGATGTCG ATTTGGTCTT TGTCAGCCAC
GCCTATTCAA ACACGGGACA ACAGGCGCCC CTCGCGCAGA TTATCTCCCT TGCCCGTGAG
CGTGGCTGTT TGAGCCTTGT GGATGTGGCG CAATCGGCGG GGATTTTGCC GCTGGATTTA
GCCAAGTTAC AACCGGATTT TATGATTGGC TCGAGTGTTA AATGGTTATG CTCTGGCCCT
GGTGCGGCGT ATTTATGGGT TAATCCGGCC ATCTTGCCCG AATGTCAGCC GCAGGATGTG
GGTTGGTTTA GCCATGAAAA TCCCTTCGAG TTTGATATTC ATGATTTTCG CTACCATCCA
ACGGCGTTAA GGTTTTGGGG CGGTACGCCT TCCATCGCTC CCTATGCCAT TGCCGCCCAT
AGCATTGAAT ATTTCGCCAA TATTGGCTCA CAAGTCATGC GCGAGCATAA CCTGCAACTG
ATGGAGCCTG TGGTACAGGC ATTGGATAAT GAACTAGTTT CGCCACAGGA AGTAGACAAA
CGTAGCGGCA CGATAATCCT GCAATTTGGT GAGCGGCAGC CACAAATATT GGCCGCCTTG
GCTGCAGCGA ATATCAGTGT CGATACCCGC AGTTTAGGGA TACGCGTATC ACCGCATATC
TATAACGATG AAGCCGATAT CGCGCGGTTG CTTGGGGTGA TAAAGGCCAA TCGTTAA
 
Protein sequence
MLLNVKQDFC LAGPGYLLNH SVGRPLKSTE QALKQAFFAP WQESGREPWG QWLGVIDNFT 
AALASLFNGQ PQDFCPQVNL SSALTKIVMS LDRLTRDLTR NGGAVVLMSE IDFPSMGFAL
KKALPASCEL RFIPKSLDVT DPNVWDAHIC DDVDLVFVSH AYSNTGQQAP LAQIISLARE
RGCLSLVDVA QSAGILPLDL AKLQPDFMIG SSVKWLCSGP GAAYLWVNPA ILPECQPQDV
GWFSHENPFE FDIHDFRYHP TALRFWGGTP SIAPYAIAAH SIEYFANIGS QVMREHNLQL
MEPVVQALDN ELVSPQEVDK RSGTIILQFG ERQPQILAAL AAANISVDTR SLGIRVSPHI
YNDEADIARL LGVIKANR